Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0660 ATGCAGATACGGCCATGCCACTCCATCACCACTCAAACCGTTGTTCCACCGCTTTATAGGAATTCATGCCACCGCCACCTCTTGCCACCATCCAGTGCCGCCGTCTCCACGGCGGCGCTGAAGACTCGGAGGACCCACTCAATGCCTGCGGAGAAAATGGAGGTTTTCAAGTCGTTGGAGGGGTGGGCCTCGGAATGCGTGCTACCACTGTTGAAGCCCGTGGAGCAATGCTGGCAGCCCCAGAACCTGGTTCCTGACTCAACACTGCCGTTCGAAGAGTTCAGTGAGGAGGTGAAGGCCCTTCGCGAACGCACCAAGGAGCTACCTGACGAGTACTTCGTGGTGTTGGTGGGTGACATGGTCACCGAAGACGCGCTTCCCACCTACCAGACTATGATCAACAACCTCGACGGGGTGAGAGACGAGTGCGGAACCAGCCCAAGCCCGTGGGCTGTGTGGACCCGGGCCTGGACGGCAGAAGAAAACAGACACGGAGATTTGCTCAGAACTTACTTGTACCTCTCTGGTCGCGTTGACATGGCTAAGGTTGAGAAAACTGTCCATTACCTCATCGGAGCTGGCATGGACCCTGGAACAGAGAACAACCCTTATTTGGGGTTTGTGTACACTTCATTCCAAGAGCGAGCAACTTTCGTGGCGCACGGGAACACTGCACGGCTTGCGAAGGAAGGGGGCGATCCAGTGCTGGCACGCATATGCGGGACTATCGCTGCGGATGAGAAACGGCACGAGAATGCATACTCGAGGATTGTGGAGAAGCTTCTAGAAGTGGACCCCAGTGGGGCAATGGTTGCTATAGGAAACATGATGGAGAAGAAGATTACAATGCCGGCACATCTTATGTACGACGGGGAAGACCCTAAGCTGTTCGAGCATTACTCTGCAGTGGCCCAGCGAATGGGCGTGTACACGGCCAATGATTATGCAGATATCTTGGAGTTTCTAGTTGGACGGTGGAGATTGGAGAAGCTGGAAGGTTTGACGGGTGAGGGAAAGCGGGCGCAAGATTACGTGTGTGGGTTAGCGCCTAGGATTAGGAGGTTGCAAGAACGCGCCGATGAGCGAGCGCGTAAGATGAAGCCGCAGAGTATCAACTTCAGCTGGATCTTCAATAGAGAACTGCTTTTGTGA 1152 0.5469 MQIRPCHSITTQTVVPPLYRNSCHRHLLPPSSAAVSTAALKTRRTHSMPAEKMEVFKSLEGWASECVLPLLKPVEQCWQPQNLVPDSTLPFEEFSEEVKALRERTKELPDEYFVVLVGDMVTEDALPTYQTMINNLDGVRDECGTSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMAKVEKTVHYLIGAGMDPGTENNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSRIVEKLLEVDPSGAMVAIGNMMEKKITMPAHLMYDGEDPKLFEHYSAVAQRMGVYTANDYADILEFLVGRWRLEKLEGLTGEGKRAQDYVCGLAPRIRRLQERADERARKMKPQSINFSWIFNRELLL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0660 383 SUPERFAMILY Ferritin-like 39 382 IPR009078 -
Pvu1g0660 383 CDD Acyl_ACP_Desat 51 359 IPR005067 GO:0006631|GO:0045300
Pvu1g0660 383 PIRSF Dlt9_acylACP_des 9 383 IPR005067 GO:0006631|GO:0045300
Pvu1g0660 383 Gene3D Ribonucleotide Reductase, subunit A 35 383 IPR012348 GO:0016491
Pvu1g0660 383 Pfam Fatty acid desaturase 51 377 IPR005067 GO:0006631|GO:0045300
Pvu1g0660 383 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 35 382 IPR005067 GO:0006631|GO:0045300
Pvu1g0660 383 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 35 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0660 Pvu-Chr1 7999637 8001387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0660 32 381 Acyl Lipid Metabolism Gene Families AT1G43800 76.638 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0660 K03921 - gmx:100037478 680.633