Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0654 ATGGCTTCTCTCCCATTCCTCTCGCAAATTTCCCACTCTCTTTCCTTTCCGCCACATCGCCACCGCTTCCATCGCCATTTCCCCACCGCTCTCGCTGCTTCCTACCAATCTGCAGCCTCCGCAGATTCTAAAACTGAAGTATCTCGTGTTCCGGTTTTGACTTCCTCCGAGGCCTATGAAAGGCTAAAATCATTTAGAGAAAAGATAAAGGGCAAGCAACAGTTTCTTGCTATGTATTCTAGTATTTTTGATGGGATAACAACAGACCCAGCCGCTATGGTTATTCCTATGGATGACCACATGATCCATAGGGGCCACGGTGTGTTTGATACTGCTGCAATAGTGGATGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAAGTTCAGCATTCATGTCTAAAATAGATCCCCCATTTGATCGTGGAAGCATAAGGAGAATACTAATACAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGATCACTAAGATATTGGCTCTCAGCAGGACCTGGTGACTTTCAGTTATCTCCCTCTAACTGCCACCAGTCAAGTCTTTATGCAATAGTAATACAGGATCTGTCACCATCGTCGCTTAATTCCAGGGGAGTTAAAGTTGTTACTTCATCTGTTCCCATTAAACACCCCAAGTTTGCCATTACTAAGAGTGTGAATTATCTTCCAAATGTGCTCTCAAAGGTTGAAGCTGAAGAAGCTGGTGCTTTTGTAGGCATTTGGCTTGATGATGAAGGTTTTGTTGCAGAAGGGCCTAATATGAATGTGGCCTTTGTCACTAAAGAGAAGGAACTAATAATGCCTCACTTTGACAAAATTTTGAGTGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCCGAGGGTTTGTTAAGCGAGGGTAAGCTTAAGGGGATAAGGATGGAAAATGTGACTGTTGAAGAAGGTAAAAAAGCAGATGAAATGATGCTTCTTGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAACACGTTATTGGTGATGGCAAAGAGGGCCCTGTAACACAGGCTCTCTTCAATCTAATTGTTGATGACATGAAATCAGGACCCTCAACTGTTCGTATACCGGTTCCATATTGA 1125 0.4338 MASLPFLSQISHSLSFPPHRHRFHRHFPTALAASYQSAASADSKTEVSRVPVLTSSEAYERLKSFREKIKGKQQFLAMYSSIFDGITTDPAAMVIPMDDHMIHRGHGVFDTAAIVDGYLYELDQHLDRFLSSAFMSKIDPPFDRGSIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSNCHQSSLYAIVIQDLSPSSLNSRGVKVVTSSVPIKHPKFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDDEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEGLLSEGKLKGIRMENVTVEEGKKADEMMLLGSGVLVCPVVQWDEHVIGDGKEGPVTQALFNLIVDDMKSGPSTVRIPVPY* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0654 374 Gene3D - 54 194 IPR043131 -
Pvu1g0654 374 Pfam Amino-transferase class IV 107 335 IPR001544 GO:0003824
Pvu1g0654 374 Gene3D - 196 367 IPR043132 -
Pvu1g0654 374 CDD PLPDE_IV 99 357 - -
Pvu1g0654 374 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 41 373 - -
Pvu1g0654 374 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 83 362 IPR036038 GO:0003824
Pvu1g0654 374 PANTHER AMINO-ACID AMINOTRANSFERASE 41 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0654 Pvu-Chr1 7926939 7930786 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0654 K18482 - gmx:100794026 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0654 1 7926939 7930786 Pvu1g0654 1 7926939 7930786 ECH