Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0653 GACCCTGGTTTTGAGAACAACCCATATCTAGGGTATGTGTACACGTCATTCCAAGAGCGAGCAACGTTTGTGTCGCACGGTAACACAGCTCGTCTTGCAAAGGAGTGTGGTGATCCCGTGCTGGCACGCATATGTGGAAGCATCGCTGCAGATGAGAAAAGGCACGAGAACGCGTACTCAAAGATTGTAGAGAAGCTTATCGAGGTGGATCCTACCGGAGCAATGGTTGCAATAGGAACCATGATGGAGAAGAAGATCACTATGCCGGCGCATCTTATGTACGATGGGGAGGACCCCAGGCTATTCGAGCACTACGCCGAAGTGGCGCAGCGCGTGGGAGTGTACACGGCAAATGACTATGCAGACATCTTGGAGTTTCTGATCGGGCGGTGGAGACTGGAGAAACTGGAAGGTTTGAGGGGAGAGGGAAAGCGGGCACAGGATTACGTGTGTGGGTTAGCACCGAGGATCAGGAAGTTGCAGGAGCGTGCTGATGAGCGAGCGAGGAAGATGAAACCTCGTGGCGTGAAGTTCAGCTGGATCTTCAATAAAGAGCTGCATTTGTGA 567 0.5238 DPGFENNPYLGYVYTSFQERATFVSHGNTARLAKECGDPVLARICGSIAADEKRHENAYSKIVEKLIEVDPTGAMVAIGTMMEKKITMPAHLMYDGEDPRLFEHYAEVAQRVGVYTANDYADILEFLIGRWRLEKLEGLRGEGKRAQDYVCGLAPRIRKLQERADERARKMKPRGVKFSWIFNKELHL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0653 188 SUPERFAMILY Ferritin-like 1 186 IPR009078 -
Pvu1g0653 188 Pfam Fatty acid desaturase 1 182 IPR005067 GO:0006631|GO:0045300
Pvu1g0653 188 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 1 188 - -
Pvu1g0653 188 Gene3D Ribonucleotide Reductase, subunit A 1 188 IPR012348 GO:0016491
Pvu1g0653 188 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 1 188 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0653 Pvu-Chr1 7906622 7907474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0653 1 188 Acyl Lipid Metabolism Gene Families AT1G43800 76.720 3.25e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0653 K03921 - gmx:100816146 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0653 1 7906622 7907474 Pvu1g0653 1 7906622 7907474 ECH