Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0652 ATGGCCACATCCACCGCCTTCAAAATAGTTTATATTAATGACCAAAACATAGGATTTCATTCCTCTCACCACACTCGCAACTACCCACCCACACCTTCCTCATCACATCCTCCAACCATCAACATGCAGACACAAACTACTCTTCCCTTTGCATGCACTCCAAGAACCGTTCGCCACCTCATGCTGCCACCCAAGTGCGTCCTCTCCGTTTCACCGCCTTCGAAAGTGCGGAGGACCCACTCGATGCCGCCGGAAAAGTTAGAGGTTTTCAGGTCACTCGAAGGATGGGCTGCGCAGAGTATCCTACCCATGCTCAAACCCGTGGAGAAAAGCTGGCAGCCCGACAGTTTCGTTCCTGACCCATCGCTGCCATTTGAAGAGTTCATGGACGAGGTGAGGGCTCTTCGCGATCGAACCAAGGAGCTTCCTGACGAGTACTTCTTGGTGTTGGTGGGTGATATGATCACCGAGGAAGCCCTTCCGACTTACCAGACCATATTGAACAGCCTCGACGGCGTCAAAGACGAGTATGGAACCAGTCCAAGCCCGTGGGCTGTGTGGACTCGGGCCTGGTCCGCTGAAGAGAACAGACATGGAGATTTGCTCAGAACTTACCTTTATCTTTCTGGTCGCGTTGACATGAAGATGATCGAAAAAACCATTCATTACCTCATTGCTGCAGGCATG 687 0.5167 MATSTAFKIVYINDQNIGFHSSHHTRNYPPTPSSSHPPTINMQTQTTLPFACTPRTVRHLMLPPKCVLSVSPPSKVRRTHSMPPEKLEVFRSLEGWAAQSILPMLKPVEKSWQPDSFVPDPSLPFEEFMDEVRALRDRTKELPDEYFLVLVGDMITEEALPTYQTILNSLDGVKDEYGTSPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVDMKMIEKTIHYLIAAGM 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0652 229 Pfam Fatty acid desaturase 85 229 IPR005067 GO:0006631|GO:0045300
Pvu1g0652 229 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 70 229 IPR005067 GO:0006631|GO:0045300
Pvu1g0652 229 Gene3D Ribonucleotide Reductase, subunit A 71 229 IPR012348 GO:0016491
Pvu1g0652 229 SUPERFAMILY Ferritin-like 75 229 IPR009078 -
Pvu1g0652 229 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 70 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0652 Pvu-Chr1 7905234 7905986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0652 78 229 Acyl Lipid Metabolism Gene Families AT1G43800 71.053 3.09e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0652 K03921 - gmx:100816146 282.722