Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0644 ATGGCCGCTGTAGCCTCGCCCTCTACTCCGGCGGTGCTTTTCACCGCTCTCGCCGGCGTCGTCATCGTCGCCGCGATATTCTACGGCGCCAGTAGGGGCCGGCTTAAATCACCATGGTCACAAAGGAAAAGAAAACATGCTCTGTCATCTCAGCAATGGAAATGCTTGTTTACAGAAGATGGTAAATTCTGTGATGGTGGAAATAAGTTCCTGAAAAGAGTTCGCAGTGGAGGTGTTGATCCCAGTATTAGGGCTGAGGTTTGGCCATTCTTGCTTGGAGTGTATGACTTGGGCAGCAGCAAAGACGAAAGAGATGTTATAAGAACTCAAAATAGAAAGCAGTATGAGAAACTCCGCAGGCAATGTCGGAAACTCATCAAGCAAATTAATGAGAGAAATAAGTTAAATGAAGTTGGTGAAATCAGCTTTGAGGGAGATGGTAAAAGTCTGTCTCCTGATTCTGGTTCTTCCAGTTCTGACGATGCAGCCAGTGCTAGGGAATCTCTTTCTAGTGAGGATAGGAGCCCTGATGTTGAACATTCCGACAATCTGTCCCGTGCCCTGTTGGAAGGGGAAGATGTTCCTAATGCAAACAACGCTGATGCCTCTACACTGGATACCGATTTCTCTGATTCGGACTCCTCTGAAGGTCCTGAAGTAATTCAGGCAGTTCCTTCTGATGATGTTCAGGAACATAACAATCCAAACGAAGCTTCCCAGGAAGTATCTTCTCCCACCAAAGCAAAAATCCCATCAAAGGCACCAACCAATGAAGATTTTTCCACCTGGCAACGAATTATCCGACTTGATGCAGTACGGGCCAATGCTGAATGGATGTCATGTTACCCATCTCATCCCTCATTATCAGACAGCAGGGCACGTCGAACTGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAGGCTGGCAGAATCTTCCATGCTGCTAGACTAGTTGCTATTCTTGAAGCATATGCACTATATGACTCTGACATTGGCTACTGCCAAGGTATGAGTGACCTGCTATCTCCTATAGTTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAAGTGGGTATTCGCAGGCAACTGGATTTAGTCGCAAAAATAATCAAGTTTAAGGATTCCCACCTTTTTAGGCATTTGGAAAAGCTTCAGGCTGAGGATTGTTTTTTTGTCTATAGAATGGTGGTGGTAATGTTTCGAAGGGAATTGACATTTGAACAGACCCTTTGCCTATGGGAAGTGATGTGGGCGGATCAAGCGGCAATCAGGGCAGGTATTGGGAAATCTTCGTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGAAGATTTATTGCTTTATGCAATTGCAGCTTCGGTGTTGCAGAAGAGGAAATTGATCATCGAGAAGTACAGCAGCATGGATGAGATCATTAGGGAATGCAATAGTATGTCAGGTCATCTTGATGTTTGGAAACTGCTTGATGATGCACATAACTTAGTGGTCATCCTGCATGACAAAGTAGAGACATCATTCTCATGA 1581 0.4516 MAAVASPSTPAVLFTALAGVVIVAAIFYGASRGRLKSPWSQRKRKHALSSQQWKCLFTEDGKFCDGGNKFLKRVRSGGVDPSIRAEVWPFLLGVYDLGSSKDERDVIRTQNRKQYEKLRRQCRKLIKQINERNKLNEVGEISFEGDGKSLSPDSGSSSSDDAASARESLSSEDRSPDVEHSDNLSRALLEGEDVPNANNADASTLDTDFSDSDSSEGPEVIQAVPSDDVQEHNNPNEASQEVSSPTKAKIPSKAPTNEDFSTWQRIIRLDAVRANAEWMSCYPSHPSLSDSRARRTAEAVGLKDYGHLEAGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSSWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMSGHLDVWKLLDDAHNLVVILHDKVETSFS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0644 526 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 376 513 IPR035969 -
Pvu1g0644 526 Pfam Rab-GTPase-TBC domain 318 438 IPR000195 -
Pvu1g0644 526 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 521 - -
Pvu1g0644 526 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 56 399 IPR035969 -
Pvu1g0644 526 MobiDBLite consensus disorder prediction 227 256 - -
Pvu1g0644 526 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 239 371 - -
Pvu1g0644 526 MobiDBLite consensus disorder prediction 197 219 - -
Pvu1g0644 526 MobiDBLite consensus disorder prediction 166 187 - -
Pvu1g0644 526 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 2 521 - -
Pvu1g0644 526 MobiDBLite consensus disorder prediction 143 256 - -
Pvu1g0644 526 ProSiteProfiles TBC/rab GAP domain profile. 78 439 IPR000195 -
Pvu1g0644 526 Coils Coil 108 135 - -
Pvu1g0644 526 MobiDBLite consensus disorder prediction 149 165 - -
Pvu1g0644 526 SMART tbc_4 75 484 IPR000195 -
Pvu1g0644 526 Gene3D - 375 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0644 Pvu-Chr1 7738312 7742569 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0644 - - gmx:100789579 902.894