Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0643 ATGGCTGAATCATTTCTCTTCAGCATCGCAGAGTCACTCGTAGCAAAGCTTGCTTCTCACGCTTTTCAAGAAGCTTCTCGGGTGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAACTGTCTTCTCCAATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACAGCGAAAGAAAGTGGTCAAAGCTCATGGTAGCTCCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTATCGTTACAAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGATGATAGTTATAAGTTTAGTCTTCAAATAATTGATGTTCACACACGTGTTGTTCATGGGAGAGATATGACACACTCCCGTGTGAATGATTCGGATGTGATAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATTCTAATGATGATGATACAAGCTTGGGAAAGACTACTCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCAATGAAGATGTGGGTGTGTGTTTCTGACGAATTTGACATTAAACAACTGATTATCAAAATCATCAATTCTGCCAATGATGAAGATGCTCCTCTTCACCAACAGAATTTGAACATGTTGGATCTGGAGCTACTGCAAAATCAACTTAAAAAAAAACTTTCCGGTCAAAAATTCTTACTCGTCTTAGACAATGTATGGAACGAAGACCGTGTTAAATGGGTTGAGTTGATGAATTTAATCCAAATAAGTGTATCAGGAAGTAAAATTCTTGTGAGCACACGGAGTCATTCAATTGCTTCCATGATGGGCTCAGAGGATTCATTGTCTCTCTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGCAAAAACATCCTCACTTAGTAATGATTGGGAGAGAAATTGTGACAAAATGCAGAGGGGTTCCTTTGGCAGTGAGAACATTAGGTAGTTTACTATTCTCGAAATTTGAGGCCAGTGAATGGAAATATGTGAGAGACAATGCAATTTGGAATTTGCCTCAGAAAAAAGATGACATTTTACCTGCTCTTAAATTAAGTTATGATCTCATGCCGTCCTATTTGAGGCAATGTTTTGGATTGTTGTCCCTTTACCCAAAGGATTATGGACTCAATAATTATGACATAACTGCGCTTTTGGGGGCACTTGGACTCATTGCACCACAAAAAAAGAACATGACACTTCAAGATGTGGCCAATCAATATTTGTATGAACTACTATCAATATCTTTTCTTCAAGATTTTGTTGACAATGGCACTGTTTATGTTTTTAAAATACATGATTTGGTGCATGATCTCGCTCAATTTGTTTCACGTAAGTTCCAACATAATGTAAGTTCCAACATTCAAAATATTCCAGATAATGTTCGGCATTTGTCTTTTGCTGAAAGCAGTTTGTTTGGCAATTTAGTCACCAAAAAATCAACAGTTGTGAGAACCATATTGTTTCCAAATGGTGCAGCTGCCAACAGTGAAGCCTTACTAAATACGTGTCTGTCAAAGTTCAAATGCTTGCGAGTTTTGAATTTACGTGGTGCTACATTCGAGACTTTGCCTCGTTCCATTGCTAAACTCCCCGAGTCTATTTGCAAGCTCCGAAGTTTGCAACTGTTGAGGCTTGACGGATGCATGAAGCTGGAAGCATTGCCCAAAGGATTAAGAAAGTTGATAAGTCTCCATCATTTGGAGTTCAGCATAAAGCAAACTGTTTTGCCTGTAAATGAGATCGCCAACTTGGGCTTGCTTGAAATCTTGACTATTGAATCATGCCATAATGTGGAGCCCATCTTTGGAGGTGTGAAATTCCCTGTTCTTAAAGTATTGTGTGTTATTGATTGTCAGAAGACTTTGGTTGTTAAGGCCTGCGGTAATTTGGACTTGGAACTGTGGAAGGGCAACCATGATGAAGAACAAAGCCACAAGCTGAAGTTAAAAACTGCTCTATTTTCAGCTTTATCACAGCTTCATGCCTTGCCTAAATGTCTTCAAGAAGCTGCCAACTCCTTACGGTGCTTGTTAATTTCAAATTGCTACAATATTGAAACACTTTCAGATTGGTTCACAACTATGACTAATCTGAAAACACTCTCTATAAAGTATTGTCCTAAGTTGGTATCTCTCCCAGACGATATCCATCGCCTCACCGAGCTTGAAAGTTTGAGGATTAAAGGTTGTGCTGAGTTATGTAAAAAATATCAGCCCTATGTGGGAGTTTTTTGGGCCAAAATATCACACATAATAAGACATTTTAAGGGTGTCTCAATCTTTATACAAGAACCTACAATCTAA 2358 0.3893 MAESFLFSIAESLVAKLASHAFQEASRVEHNHQLREWLTQLKTVFSNAEDLLDEFECQTQRKKVVKAHGSSKDKVSHFFSSSNPLLYRYKMAQQIKDISNRLDKVADDSYKFSLQIIDVHTRVVHGRDMTHSRVNDSDVIGRKHDKEKIIELLMQQNSNDDDTSLGKTTLAKFVFNDSRIQECFPMKMWVCVSDEFDIKQLIIKIINSANDEDAPLHQQNLNMLDLELLQNQLKKKLSGQKFLLVLDNVWNEDRVKWVELMNLIQISVSGSKILVSTRSHSIASMMGSEDSLSLFVKWAFKEGEEQKHPHLVMIGREIVTKCRGVPLAVRTLGSLLFSKFEASEWKYVRDNAIWNLPQKKDDILPALKLSYDLMPSYLRQCFGLLSLYPKDYGLNNYDITALLGALGLIAPQKKNMTLQDVANQYLYELLSISFLQDFVDNGTVYVFKIHDLVHDLAQFVSRKFQHNVSSNIQNIPDNVRHLSFAESSLFGNLVTKKSTVVRTILFPNGAAANSEALLNTCLSKFKCLRVLNLRGATFETLPRSIAKLPESICKLRSLQLLRLDGCMKLEALPKGLRKLISLHHLEFSIKQTVLPVNEIANLGLLEILTIESCHNVEPIFGGVKFPVLKVLCVIDCQKTLVVKACGNLDLELWKGNHDEEQSHKLKLKTALFSALSQLHALPKCLQEAANSLRCLLISNCYNIETLSDWFTTMTNLKTLSIKYCPKLVSLPDDIHRLTELESLRIKGCAELCKKYQPYVGVFWAKISHIIRHFKGVSIFIQEPTI* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0643 785 Gene3D - 290 369 IPR042197 -
Pvu1g0643 785 Gene3D Ribonuclease Inhibitor 463 757 IPR032675 -
Pvu1g0643 785 Gene3D - 370 459 IPR036388 -
Pvu1g0643 785 Pfam Rx N-terminal domain 27 70 IPR041118 -
Pvu1g0643 785 PRINTS Disease resistance protein signature 236 250 - -
Pvu1g0643 785 PRINTS Disease resistance protein signature 322 336 - -
Pvu1g0643 785 PRINTS Disease resistance protein signature 711 727 - -
Pvu1g0643 785 PANTHER OS05G0414200 PROTEIN 26 754 - -
Pvu1g0643 785 PANTHER DISEASE RESISTANCE PROTEIN RP 26 754 IPR044974 GO:0006952
Pvu1g0643 785 Pfam NB-ARC domain 145 372 IPR002182 GO:0043531
Pvu1g0643 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 383 IPR027417 -
Pvu1g0643 785 Gene3D - 124 289 IPR027417 -
Pvu1g0643 785 Gene3D - 11 96 - -
Pvu1g0643 785 Coils Coil 38 58 - -
Pvu1g0643 785 SUPERFAMILY L domain-like 448 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0643 Pvu-Chr1 7720477 7724690 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0643 - - pvu:PHAVU_001G133600g 1028.85