Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0642 ATGAAGAGTGTGTTTGTACCATTTTTGTGTTTGGTAGCTGTGTTATTCGTCACAGTTTCAGCCATAGGGCCACCTAAGCCCCTGACTTGTGAGCAGACACAATTCTTAGTGAAGGCATGCTTAGATTTTGTCACTGATAAAACTACTGCCCCTTCAATTTCTTGCTGCCAAGGGTTGAATGAAGTGATAGTTTTATCACCTACAAAAGAAGAAAGACTTTTTGTATGTAAGTGCCTTAAGGAAGAAGGCTCTCAAATTCCTAACCTAGATCTTGGCAGGACCAAAAGTCTTCCTAAACTTTGTAATCTCTCTAAGCCCTTGGATTGCGATAGGTGA 336 0.4077 MKSVFVPFLCLVAVLFVTVSAIGPPKPLTCEQTQFLVKACLDFVTDKTTAPSISCCQGLNEVIVLSPTKEERLFVCKCLKEEGSQIPNLDLGRTKSLPKLCNLSKPLDCDR* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0642 111 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Pvu1g0642 111 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Pvu1g0642 111 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Pvu1g0642 111 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Pvu1g0642 111 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 103 - -
Pvu1g0642 111 PANTHER - 1 103 IPR000528 GO:0006869|GO:0008289
Pvu1g0642 111 Pfam Probable lipid transfer 14 107 IPR016140 -
Pvu1g0642 111 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 108 IPR036312 -
Pvu1g0642 111 Gene3D - 27 111 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0642 Pvu-Chr1 7710558 7710893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0642 8 111 Acyl Lipid Metabolism Gene Families AT4G33355 30.000 3.95e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0642 - - pvu:PHAVU_008G198200g 212.616