Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0641 ATGAAGAGTGTGTTGGTACCATTTTTGTGTTTGGTAGCTATGTTAGTTGTCACAGTTTCAGCCATAGGGCCAAAGCCCCTGACTTGTGAGCAGACACAATTCTTAGTGAAGCCATGCTTAGATTTTGTCACCGATAAAACTACTGCCCCTTCAATTTCTTGCTGTCAAGGGTTGAATGAAGTGATAGTTTTATCACCTACAAAAGATGAAAGACTCTTTATATGTAAGTGCCTTAAGGAAGAAGGCTCTCAAATTCCTAACCTAGATCTTGGCAGGACAAAAAGCCTTCCTAAACTTTGTAATCTCTCTAAGACCTTGGATTGTGATAGTTTATAA 336 0.3899 MKSVLVPFLCLVAMLVVTVSAIGPKPLTCEQTQFLVKPCLDFVTDKTTAPSISCCQGLNEVIVLSPTKDERLFICKCLKEEGSQIPNLDLGRTKSLPKLCNLSKTLDCDSL* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0641 111 Pfam Probable lipid transfer 12 106 IPR016140 -
Pvu1g0641 111 Gene3D - 26 111 IPR036312 -
Pvu1g0641 111 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Pvu1g0641 111 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Pvu1g0641 111 PRINTS Plant phospholipid transfer protein signature 70 85 IPR000528 GO:0006869|GO:0008289
Pvu1g0641 111 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Pvu1g0641 111 PANTHER - 1 102 IPR000528 GO:0006869|GO:0008289
Pvu1g0641 111 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 105 IPR036312 -
Pvu1g0641 111 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0641 Pvu-Chr1 7682171 7682612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0641 8 109 Acyl Lipid Metabolism Gene Families AT4G33355 30.556 1.19e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0641 - - pvu:PHAVU_001G062400g 227.639