Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0640 ATGAAGAGTGTGTATGTACCATTTTTGAGTTTGGTAGCTGTGTTAGTCCTCACAGTTGCAGCCACAGAGCCACCAAAGGCCCTGACTTGTGAGGAAACCAAATCCTTAGTCACACCATGCTTAGATTTCCTCACCGATAAAACCAATACTCCTCCAACTCCTTGCTGCCAAGGGTTGAATAAATTGATAGTTTCAACACCCACAAAAGAAGAAAAACTTGCTGCATGTAAGTGCCTTAAGGAAGCAGCCTCTCACATTCCTAACTTTGATGTTGGCAGGGTCAATAACCTTCCTAAAGTTTGTAATATTAATGTGAATTATCCCATCTCCAAGGACTTCGATTGCGAGAATATTATAAAAAACTAG 366 0.4071 MKSVYVPFLSLVAVLVLTVAATEPPKALTCEETKSLVTPCLDFLTDKTNTPPTPCCQGLNKLIVSTPTKEEKLAACKCLKEAASHIPNFDVGRVNNLPKVCNINVNYPISKDFDCENIIKN* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0640 121 Pfam Probable lipid transfer 12 107 IPR016140 -
Pvu1g0640 121 ProSitePatterns Plant lipid transfer proteins signature. 97 118 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 118 - -
Pvu1g0640 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 118 IPR036312 -
Pvu1g0640 121 PANTHER - 1 118 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 CDD nsLTP1 28 115 - -
Pvu1g0640 121 Gene3D - 27 119 IPR036312 -
Pvu1g0640 121 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 PRINTS Plant phospholipid transfer protein signature 106 117 IPR000528 GO:0006869|GO:0008289
Pvu1g0640 121 SMART aai_6 30 115 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0640 Pvu-Chr1 7678523 7679100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0640 2 118 Acyl Lipid Metabolism Gene Families AT2G15325 33.333 1.14e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0640 - - pvu:PHAVU_008G198800g 145.206