Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0637 ATGGCCACACTTCAAGCTTCACTTCTCTCAAAACCTTCTCTTCCATTTCCCTTCCCATTCCCATTCCCATTCTCGTTCCTCTCTGCGAACCACTCCCCATTCGCCCTCTCCTTCCACTCCACGCGCCGCCTTTCCTCCACGCTCCTCTGCTGCACCTTTCGCTCTGACAGCGTCGGTTCCCGGTCTGAACCCAATGACAACCCATCCGAATTCGGTTCGGGCGACGCCGAAGCGGACGCCAGCGCGGGTGTAATTTATTCGACGGAAGAAGGTGCAGTTTTGGTTTCTGATTCGGGCGAGGCGAGTTTGGAAGGTGCGGAGACTGTGCTGCGGAGTGGCGCGGATTTGGAGAGCGAAGGAAATGTGGCGAATGGAAGGTTTTCGATAGTGGTGTTATTTGTGGGACTGTGGGTGAAGGCGAGGGAGCGTGTAAAGAAGGCTTTCGCGGAGTTTCTTGATTGGTGGCCGTTTTGGCGGCAGGAGAAGCGCGTCGAGCGGTTGATCGCGGACGCCGACGCGAATCCGCAAGATGCTGCTAAACAGAGTGCTCTGTTTGTGGAACTCAATAAGCACAGTCCTGAATCTGTCATCAAGCGGTTTGAACAAAGGGATCGAGCAGTGGACAGTAGAGGGGTTGCGGAATATCTTCGAGCTCTTGTGATTACTAATTCTATTAGTGAATATCTTCCAGATGAGGATTCTGGAAAAACTTCTAGCCTTCCTATCCTGTTGCAAGAGTTGAAGCAACGTGCATTGGGTAACTCAGATGAAACTTTTCTTAATCCCGGAATATCTGAGAAGCAGCCATTACATGTGGTTATGGTTGATCCAAAAGTATCAAATAAATCACGTTTTGCACAAGAGCTTATCTCGACTATTTTGTTTACCATAGCTGTGGGGTTGGTCTGGTTTATGGGTGCTGCGGCACTTCAAAAATACATTGGAAGCTTGGGGGGGATTGGACCTTCAGGAGTTGGATCAAGTTCTTCCTATGCCCCAAAGGAGCTAAATAAGGAAGTGATGCCAGAAAAGAATGTAAAAACCTTTAAGGATGTGAAAGGTTGTGATGATGCAAAACAAGAACTTGAGGAAGTTGTGGAGTACCTAAAAAATCCATCTAAGTTTACACGCCTTGGAGGAAAGTTGCCAAAGGGGATTCTTTTGACAGGAGCACCTGGAACTGGAAAAACTCTGCTAGCGAAGGCTATTGCTGGAGAAGCTGGTGTTCCCTTTTTCTATCGGGCAGGCTCTGAATTTGAGGAGATGTTTGTTGGTGTCGGTGCTCGGCGTGTAAGATCATTATTTCAAGCTGCGAAAAAGAAGGCACCTTGTATCATTTTCATCGATGAAATTGATGCTGTTGGATCAACAAGAAAACAATGGGAGGGTCACACAAAGAAGACATTACATCAACTACTTGTCGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTAATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCTCTAACAAGGCCTGGTAGATTCGATCGACATATTGTTGTACCAAATCCAGATGTACGAGGTCGGCAAGAAATACTTGAACTCTATCTGCAAGATAAGCCTATAGCTGATGATGTAGATGTTAAAGCAATTGCTCGTGGTACCCCAGGGTTCAATGGGGCAGATCTTGCGAACTTGGTAAATGTTGCTGCCATTAAAGCTGCAGTTGAAGGTGCAGAGAAAGTAACAGCTTCACAGTTGGAGTTTGCAAAAGACAGAATAATTATGGGTACTGAGCGGAAAACAATGTTTATATCTGAAGAGTCAAAGAAGCTCACTGCCTATCATGAGAGCGGCCACGCAATTGTTGCCCTTAACACTGATGGTGCACATCCAATTCACAAGGCAACAATCATGCCACGTGGATCTGCTTTAGGAATGGTCACTCAGCTTCCCTCAAGTGACGAGACATCAATAAGCAAGAAACAGTTGTTAGCTCGCCTTGATGTTTGTATGGGAGGAAGAGTTGCAGAAGAGCTTATCTTTGGCCGGGATTATGTCACAACTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGGTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTCATATAAAAGAGCGACCAAGTTCTGAAATGCAGTCACGTATTGATGCAGAGGTTGTGAAACTCCTTCGGGAAGCATATGATCGTGTTAAAGCCCTTCTGAAAAAGCATGAGAAGGCATTACATGTGTTGGCGCACGCTTTATTAGAGTGTGAGACACTTAGTGCAGAAGAAATCAGGCGAATACTTCTCCCATATCGGGAAGGACGGCTACCAGAACAACAGGAACAAGAAGCAGCGGAAGGGGATCTTGTGTTAGTGTAA 2391 0.4638 MATLQASLLSKPSLPFPFPFPFPFSFLSANHSPFALSFHSTRRLSSTLLCCTFRSDSVGSRSEPNDNPSEFGSGDAEADASAGVIYSTEEGAVLVSDSGEASLEGAETVLRSGADLESEGNVANGRFSIVVLFVGLWVKARERVKKAFAEFLDWWPFWRQEKRVERLIADADANPQDAAKQSALFVELNKHSPESVIKRFEQRDRAVDSRGVAEYLRALVITNSISEYLPDEDSGKTSSLPILLQELKQRALGNSDETFLNPGISEKQPLHVVMVDPKVSNKSRFAQELISTILFTIAVGLVWFMGAAALQKYIGSLGGIGPSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPIADDVDVKAIARGTPGFNGADLANLVNVAAIKAAVEGAEKVTASQLEFAKDRIIMGTERKTMFISEESKKLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSSDETSISKKQLLARLDVCMGGRVAEELIFGRDYVTTGASSDLHTATELAQYMVSNCGMSDAIGPVHIKERPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKALHVLAHALLECETLSAEEIRRILLPYREGRLPEQQEQEAAEGDLVLV* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0637 796 Pfam Peptidase family M41 596 771 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu1g0637 796 Gene3D - 326 515 IPR027417 -
Pvu1g0637 796 CDD AAA 360 514 - -
Pvu1g0637 796 ProSitePatterns AAA-protein family signature. 485 503 IPR003960 GO:0005524|GO:0016887
Pvu1g0637 796 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1 122 778 - -
Pvu1g0637 796 Pfam ATPase family associated with various cellular activities (AAA) 386 514 IPR003959 GO:0005524|GO:0016887
Pvu1g0637 796 Pfam AAA+ lid domain 537 580 IPR041569 -
Pvu1g0637 796 Coils Coil 729 749 - -
Pvu1g0637 796 Gene3D Peptidase M41 590 777 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu1g0637 796 SMART AAA_5 382 517 IPR003593 -
Pvu1g0637 796 SUPERFAMILY FtsH protease domain-like 597 774 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu1g0637 796 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 789 IPR005936 GO:0004176|GO:0004222|GO:0016020
Pvu1g0637 796 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 334 772 IPR005936 GO:0004176|GO:0004222|GO:0016020
Pvu1g0637 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 615 IPR027417 -
Pvu1g0637 796 Gene3D - 516 589 - -
Pvu1g0637 796 PANTHER METALLOPROTEASE M41 FTSH 122 778 - -
Pvu1g0637 796 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0637 Pvu-Chr1 7618948 7635797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0637 2 774 Miscellaneous Gene Families AT5G53170 75.408 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0637 K08955 - gmx:100815980 1311.98