Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0626 ATGGACAGCCGAAACGTTGTTGTTTGCGACAATGGAACCGGATATGTGAAGTGTGGATTTTCTGGGGAGAATTTCCCCACATCGGTCTTTCCTTGTGTAGTGGGAAGGCCAATGCTCCGTTACGAAGAATCACTTACCGAACAAGAGCTTAAGGATATTGTTGTTGGCGAAAGCTGTGCAGATTTGCGACATCAGCTTGATGTATCTTATCCTGTGAACAACGGGATAGTGCAAAATTGGGATGATATGTGTCATGTATGGGATCATGCATTTTACAATGAATTGAAGATTAATCCTCCAGACTGCAAGATTCTACTCACCGATCCGCCTCTTAATCCTTCCAAGAATCGGGAAAAAATG 360 0.4333 MDSRNVVVCDNGTGYVKCGFSGENFPTSVFPCVVGRPMLRYEESLTEQELKDIVVGESCADLRHQLDVSYPVNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDPPLNPSKNREKM 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0626 120 Pfam Actin 2 120 IPR004000 -
Pvu1g0626 120 PANTHER ACTIN 1 120 IPR004000 -
Pvu1g0626 120 PANTHER ACTIN-RELATED PROTEIN 2 1 120 - -
Pvu1g0626 120 SUPERFAMILY Actin-like ATPase domain 2 120 IPR043129 -
Pvu1g0626 120 Gene3D - 2 120 - -
Pvu1g0626 120 PRINTS Actin signature 25 34 IPR004000 -
Pvu1g0626 120 PRINTS Actin signature 50 61 IPR004000 -
Pvu1g0626 120 PRINTS Actin signature 62 84 IPR004000 -
Pvu1g0626 120 PRINTS Actin signature 116 120 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0626 Pvu-Chr1 7445439 7446210 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0626 2 120 Miscellaneous Gene Families AT2G42100 49.580 1.11e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0626 K17260 - pvu:PHAVU_001G0609000 261.536