Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0625 GTTCCTGTTGTTGATGGCTATTCTTTCCCTCATCTAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTTGTTGATTTGCTTTCAAGGAGGGGGTATGCATTAAATAGGACTGCTGATTTTGAGACTGTTAGGGAAATCAAAGAGAAGCTATGCTATACAAGTTACAACTACAAGAGGGAATACCAGTTGGGGCTTGAGACCACCATCCTTGTTAAAAATTATACTCTTCCGGATGGAAGGGTCATTAAAGTAGGCACCGAAAGGTTCCAAGCTCCTGAGGCTCTTTTCACTCCGGAACTTATAGACGTAGAAGGTGATGGAATGGCTGACATGGTTTTTCGCTGCATTCAGGAAATGGATATTGACAATCGGATGATGCTATATCAACACATAGTTTTAAGTGGAGGGAGCACCATGTATCCTGGATTACCAAGCCGATTGGAAAAGGAAATACTTGATCGTTATCTTGATGTTGTCCTGAAGGGTAACAGAGATGGATTGAAGAAATTACGACTAAGAATAGAGGATCCACCACGCAGGAAGCACATGGTGTACCTTGGCGGCGCTGTACTAGCAGGAATAATGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAAATTATCTAGAAGAAGGAATTGCTTGCTTGAGCAGGTGTGGCCAGGCATGA 681 0.4273 VPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYTSYNYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNRDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINRENYLEEGIACLSRCGQA* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0625 226 SMART actin_3 1 224 IPR004000 -
Pvu1g0625 226 PANTHER ACTIN 1 222 IPR004000 -
Pvu1g0625 226 Pfam Actin 1 220 IPR004000 -
Pvu1g0625 226 Gene3D - 188 216 - -
Pvu1g0625 226 Gene3D - 1 187 - -
Pvu1g0625 226 Gene3D Actin; Chain A, domain 4 18 109 - -
Pvu1g0625 226 PANTHER ACTIN-RELATED PROTEIN 2 1 222 - -
Pvu1g0625 226 SUPERFAMILY Actin-like ATPase domain 1 221 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0625 Pvu-Chr1 7432246 7439589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0625 1 222 Miscellaneous Gene Families AT2G42100 39.189 1.61e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0625 K17260 - gmx:100803980 453.751