Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0623 ATGCGGATATTTGCCGGCGCCCACCATTCCTTTCAACGTTCTTCCTCAACAGTTCGGAATAGAGAATTCGCAAGGGGAGTGTGTTCCATTCGAACCCTCTCTTCAAACCCCGAAATGAAAGACCTTTCAGATTACTTAGATTCCCTAAAAAATTTCGAGAAATCAGGATTGCCCAGAGGTGCCGGCACCGATTCAGACGAGGGTTTCGATCTGGGTAGAATGAGACGCCTCATGGAGCGTTTCGGTAATCCTCACACCAACTTCAAGGCGGTTCATATTGCTGGGACTAAGGGAAAGGGATCAACAGCTGCATTTATATCTAATATTCTGAGGACCGAAGGTTATTCTGTTGGTTGTTACACTAGTCCACATATCCTGACCATCAGGGAGCGTATTTTACTAGGAAGATCTGGCCATCCAGTGTCAGGAAAGTTATTGAATGATCTCTTTCACAGGATCAAGCCGAAACTTGAGCAGGCAATGAAAGAGGAAAATGGTTGCATAAGCCATTTTGAGGTTTTCACTGCAATGGCATTTGTCCTATTTGCTGATGAGAATGTTGACATTGCTGTTATTGAGGCTGGCTTAGGGGGTGCACGAGATGCAACAAATATCATATCCAGCTCTGGACTTGCTGCTGCAGTCATAACTACTGTAGGTGAGGAACATTTGGCAGCTCTTGGGGGTTCTTTGGAAACAATTGCAATGGCAAAGGCAGGAATCATAAAACAAGGCTGCCCATTGGTGTTGGGTGGGCCATTTGTCCCTCATATTGAGCGCATTATTCGAGATAAAGCAGCAACCATGGAATCACCTGTAGTGTCAGCATATGATACCGGGAATAGGTGTACTCTGAAAAGTTTCAGTATAGTCAATGGAAGGCCTTATCAAATTTGTGATATAGTGATACAAGTTGTGAAAGACTTGAAGATGTCTTGTAAGTTACATGATGTGAAGTTGAAAATGCTTGGAGATCACCAGCTTCAAAATGCAGCTACTGCTACTTGTGTGGCTCTTTGTCTTCGTAATTTAGGATGGAGTATTTCTGATGAATCAATTAGGTCTGGTTTAGAGCATACACATCTCCTTGGAAGGAGTCAATTTCTAACATCTGAAGAAGCAGGGGTATTAGGACTTACTGGAGCAACAGTACTACTTGATGGAGGTGGACATGTGGAGACTGTCCTTTTGACAGAAGCTGCTATTGCTGGAGGTGTAACTAGAACAACATCAGCATCTTTGTTAAGAGATTCTTGGATTAAAGCTTCTGATGAGCTTGGCATTGGGATATTTCATGATGGAATGGCAGAATATAATGAATTAATAGATCAGCCAGTAGGATCTGAAAGCAATTTGGGTGATGGTATGACCATCTTGGCTACTGAGTCATCTTTAAAGAGTTCTTTGAGAACTGCAAATAAGATTCTAACCAGAAGAGGGGAAGAGAAGGGTGTTATTGTCTTCACTGGATCTCTGCATATTGCAGCTTCAGTCTTAGCCTCTCTTTCTGGTTAA 1515 0.4277 MRIFAGAHHSFQRSSSTVRNREFARGVCSIRTLSSNPEMKDLSDYLDSLKNFEKSGLPRGAGTDSDEGFDLGRMRRLMERFGNPHTNFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHILTIRERILLGRSGHPVSGKLLNDLFHRIKPKLEQAMKEENGCISHFEVFTAMAFVLFADENVDIAVIEAGLGGARDATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFVPHIERIIRDKAATMESPVVSAYDTGNRCTLKSFSIVNGRPYQICDIVIQVVKDLKMSCKLHDVKLKMLGDHQLQNAATATCVALCLRNLGWSISDESIRSGLEHTHLLGRSQFLTSEEAGVLGLTGATVLLDGGGHVETVLLTEAAIAGGVTRTTSASLLRDSWIKASDELGIGIFHDGMAEYNELIDQPVGSESNLGDGMTILATESSLKSSLRTANKILTRRGEEKGVIVFTGSLHIAASVLASLSG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0623 504 PANTHER DIHYDROFOLATE SYNTHETASE-RELATED 385 501 - -
Pvu1g0623 504 PANTHER DIHYDROFOLATE SYNTHETASE-RELATED 36 389 - -
Pvu1g0623 504 Pfam Mur ligase middle domain 93 338 IPR013221 GO:0005524|GO:0009058|GO:0016881
Pvu1g0623 504 Gene3D - 59 362 IPR036565 GO:0005524|GO:0009058
Pvu1g0623 504 ProSitePatterns Folylpolyglutamate synthase signature 1. 91 114 IPR018109 GO:0004326|GO:0005524|GO:0009396
Pvu1g0623 504 ProSitePatterns Folylpolyglutamate synthase signature 2. 191 206 IPR018109 GO:0004326|GO:0005524|GO:0009396
Pvu1g0623 504 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 36 389 IPR001645 GO:0004326|GO:0005524|GO:0009396
Pvu1g0623 504 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 385 501 IPR001645 GO:0004326|GO:0005524|GO:0009396
Pvu1g0623 504 SUPERFAMILY MurD-like peptide ligases, catalytic domain 68 361 IPR036565 GO:0005524|GO:0009058
Pvu1g0623 504 TIGRFAM folC: bifunctional protein FolC 71 499 IPR001645 GO:0004326|GO:0005524|GO:0009396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0623 Pvu-Chr1 7384564 7392973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0623 K20457 - gmx:100816933 786.178