Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0616 ATGCAGAATCTGCAACAAAAGGCTTCCGAATGGAGTGGTGTTGCGACAGAGGAAGCTTTCGCCATCGACACAACCAACCTCTTTCACAAGCTTGGCCTTCAAACCTTCATTAACCTCTCCACCAATTTCTACAACAGGGTATATGGTGACGAGGAAGAGTGGTTTCGTTCAATATTCGCTGATTCTGAGAAAGAAAACGCAATTCAAAACCAATACGAGTTCTTCGTGCAACGAATGGGTGGACCTCCTCTCTTTTCTCAAAGAAGAGCAAGCTGTGGCAAATCTAGATTGGAAAAGGGATTGCGCTTTAAACATGGTGAAAAGTTCTCTGCCAATCATAAGGGAACCAATAAACCTTACTTCTTGATACAAATGGATGAGGAAGTAGATAATGGAACCTTAACAAGAGGTGCAATTAGATTCATGAGGTTTATTAATGGAATTAAGATACAAACACTTACAAGGTTTCTGAGGTTACATGTTCACAAGGCACCCCAATTTAAGGTAGTAGTTAGAAATGGTGACCATTTGGAATGTGAGGGTCAAGTCAAACACATTCCAGTCAACATTCAAGGTCACTGTTTAATAGTTTTAGCATATTTTCTCTCAATTGTTGCAGTAGAAATTGTTCTTGGTACTCAATGCCAAAAGAATGAGATTGAAAGAATAGTTGTTGGGATAGTCCAGTCTAGTTCTAGTCCTTTTTTTCCCTTTCATACTGCTGGTAAAAAGGAAAGATGGAATTTAGGCTTTTGTGCCAATTATCGTGCTTTAAATGTGCATGAAATAGTGCCAATACTATCCTCGATTAAACAACTCAGGGCTCTCACTGAACCCTTTGCCTTCGAGACAGATGCATCCTCCATTGTTATTGGGGATGTCCTCATGATATCAAGACAATGCAAAGTTAGTCAACCAATTGTTTATAATACCATTGTGGAAAACCATACGGGGTTATGGTTTTGGAAAGGAAAATTGTCAATTCCATCTCATTCCACTATCAAGAAGATAACTCTTGAGGAATTTCATGATTCACCAGTTGGTGGTCATGCAGGTTTTCCACGAACCTTGGCCCATGTATCAACCCAATTTTGTGGCAACCCAATTTTGTGGCAGGGAGTGATACCAAAGTACTTACTGGATGACGAACAAGAACAGTTGTCTCCACCACTTGACTTTGAGGACAAGGTCAGTTTCATGGGAAAGAGTTATGATGCGGGACATCCTGCTCTAATTGGTCGACATCGCCCATTTCCTGTAACGCATCAAGCTGCAGAGAGGTGGTTACATCACATGCAACAAGCATTAGACAGTACTCCAGATATAGATGATGACTCAAAGACCAAAATGATGAACTTTTTCAGGCACACTGCATATTTTTTGGTAGCTGGAGATGAGCTAAAGAATAAAAATAACCAACAGATTCCCTGCAAACATGCAGCCAAAAGAGATGATTAA 1458 0.4026 MQNLQQKASEWSGVATEEAFAIDTTNLFHKLGLQTFINLSTNFYNRVYGDEEEWFRSIFADSEKENAIQNQYEFFVQRMGGPPLFSQRRASCGKSRLEKGLRFKHGEKFSANHKGTNKPYFLIQMDEEVDNGTLTRGAIRFMRFINGIKIQTLTRFLRLHVHKAPQFKVVVRNGDHLECEGQVKHIPVNIQGHCLIVLAYFLSIVAVEIVLGTQCQKNEIERIVVGIVQSSSSPFFPFHTAGKKERWNLGFCANYRALNVHEIVPILSSIKQLRALTEPFAFETDASSIVIGDVLMISRQCKVSQPIVYNTIVENHTGLWFWKGKLSIPSHSTIKKITLEEFHDSPVGGHAGFPRTLAHVSTQFCGNPILWQGVIPKYLLDDEQEQLSPPLDFEDKVSFMGKSYDAGHPALIGRHRPFPVTHQAAERWLHHMQQALDSTPDIDDDSKTKMMNFFRHTAYFLVAGDELKNKNNQQIPCKHAAKRDD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0616 485 Gene3D Globins 397 468 IPR012292 GO:0019825|GO:0020037
Pvu1g0616 485 Gene3D Globins 1 105 IPR012292 GO:0019825|GO:0020037
Pvu1g0616 485 SUPERFAMILY Globin-like 26 89 IPR009050 -
Pvu1g0616 485 Pfam Bacterial-like globin 26 89 IPR001486 GO:0019825
Pvu1g0616 485 Pfam Bacterial-like globin 406 459 IPR001486 GO:0019825
Pvu1g0616 485 PANTHER TWO-ON-TWO HEMOGLOBIN-3 404 474 IPR044203 GO:0005344|GO:0015671
Pvu1g0616 485 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 91 IPR044203 GO:0005344|GO:0015671
Pvu1g0616 485 SUPERFAMILY Globin-like 400 462 IPR009050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0616 Pvu-Chr1 7200757 7207239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0616 - - pvu:PHAVU_001G060000g 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0616 1 7200757 7207239 Pvu1g0616 1 7200757 7207239 ECH
Pvu1g0616 1 7200757 7207239 Pvu9g1075 9 15800402 15801939 PCT