Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0608 ATGCAACCCCAACTCAGTTCAAGAATCAATTTGGTCGAATTAAAGGCGCAGATTTTGAAGAGGATTGGGGCGGAGAAGTCGAAGCAGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTTGATAGGTCATGTTATCGGGTACTTGGCAGGGAGAATCTTCCGTTACACAATCATTTCATAAAGTCAATTCTGAAAAATGCCTGCCAAGCCAAAACCCCACCCCGAGTCCAGCATCTGACAGGTCCTCCAAAATCTGGAACACTTGTCAATCATGCATCTGGTCGAGAGGATGGACACGAACTTAGTGTTGTTAACATCCAAAATCAGAACGTTTCCATTTGGTCCAATGGGGTTGTGCCGGTTTCGCCACGCAAGTTAAGGTCTGGAGTGCGAAAGCTTAAAGATAGACTGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGCAGTAGTAAGGTTGATATGGAGAATGGAATTCTTACTCCATGCAATTATCAAGGACCTACACAACATCTTCAGGTAGTTGATGAGCTACCTGAGAATGGTATGGGGGATTCTCTTCAGAGACCTGCTGAGAAATCAAGTATACATGGCAAAGGACCAACCGATGTATCAATTATTGAAGATGGGGAAGACGTAGAGCGGTTAAGTTGCCTCAATTTTTCTAGAAGTCCCTTGTTAGCACCACTTGGGATTCCCTACTGCACCAGAAGTGTTGGTGGGGCTCACAAAGCGTTGCCAGTGAATGGCACTAGTAATTTTGTTAGTTGTTGTGACAGTGGTAGATTATCTAATACAGATACATTGAGAAGGCGCATGGAGCAGATTGCCGCAGTACAGGGCCTTGGAGGTGTTTCTATGGAATGTGCAAATACATTGAATAATATGTTAGATGTGTACTTGAAAAGGTTGATCAGATCTTGTGTTAATTTAGTAGGAGCTAGGTCTGCAAATGAACAGAGGAAGCTTCCTGTCTCGAAACAGCCGATTCAGGGGAAGGTCATTAATGGTGTCTGGCCAAATAATCATTTACATGTGCAGAGTGCCGGTGGTGGGCTGGCAGAACCTGAGGCTGGACAAGGACCACCACACTTGGTATCTTTGCATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCTACTTGGAGAAGATTGGCCAGTACAATTAGAGAAAATTTCTATGCGATCATTTGAGGAATGA 1254 0.437 MQPQLSSRINLVELKAQILKRIGAEKSKQYFYYLNRFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPRVQHLTGPPKSGTLVNHASGREDGHELSVVNIQNQNVSIWSNGVVPVSPRKLRSGVRKLKDRLSPLGPNGKVDSVAHQSTATEDSSSKVDMENGILTPCNYQGPTQHLQVVDELPENGMGDSLQRPAEKSSIHGKGPTDVSIIEDGEDVERLSCLNFSRSPLLAPLGIPYCTRSVGGAHKALPVNGTSNFVSCCDSGRLSNTDTLRRRMEQIAAVQGLGGVSMECANTLNNMLDVYLKRLIRSCVNLVGARSANEQRKLPVSKQPIQGKVINGVWPNNHLHVQSAGGGLAEPEAGQGPPHLVSLHDFKVAMELNPQLLGEDWPVQLEKISMRSFEE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0608 417 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 329 IPR024738 GO:0070461
Pvu1g0608 417 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 417 - -
Pvu1g0608 417 MobiDBLite consensus disorder prediction 154 170 - -
Pvu1g0608 417 MobiDBLite consensus disorder prediction 197 222 - -
Pvu1g0608 417 MobiDBLite consensus disorder prediction 139 170 - -
Pvu1g0608 417 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 417 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0608 Pvu-Chr1 7064506 7067223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0608 - - gmx:100811524 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0608 1 7064506 7067223 Pvu1g0608 1 7064506 7067223 ECH
Pvu1g0608 1 7064506 7067223 Pvu9g1037 9 15412452 15415127 PCT