Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0602 ATGGATTCCATCTACGCGAGCTCCTCGTGCACGGTTCCTCACCTTCTCCGTCGCGACACTCGGCTGTTGCCGCCGCGAACCCTGGATTCGATTGCTCCATCTTCGCTTCGGCGAGCGAAGAAGGCCCAGCGCTTGCGGGTTTCGAGTTCCGCCGCGACGAACGGCGCCGTTTCGAGGTCGCTGCAGGGAGTGAGCAGCTCTGCGCTGGAGCAGCTCGACATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCGCCCGAGATCGTGAGGAATAAGGTTTTAGAATCAAGAGGATCCACTTTGTCACTTATGTTGCGGGGAGTGGAGATAGTTTGGAATCTGGGTTTGTACTGGTCTAACTTGGTGTACGATTTCCTGGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCCTTTATTAAAGCTGGTCAGGTCCTCGCAAACAGGCCAGATATCATTCGAGAAGATTATATGAATGAACTCTGCATCCTTCAAGATGATGTTCCTTCATTTCCCAATCAAATTGCCTTCAGAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTTAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGAGCAACATTACGTGCCACTGGCGAGGATGTTGCTATCAAGGTTCAGAGGCCTGGGATAGAGCCCATTATATATCGGGATCTTTTCCTATTCCGCACTTTGGCTTCATTCTTAAATGGCATCAGTATACAGAAACTGGGATGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAAGCCCGAAATCTTGAAGACTTTCTTGAGAATTTTAAAAATGACCCTACTGTCAAAATTCCCAGGGTTTACAAACAATTTTCTGGTCCACGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGCACCAATCCACAGGCTATAAAAGAAGCTGGTCTTGATGTTGATGGATTTTTAACAATTGGAGTGAGTGCTGCCCTACGACAATTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGAGATGGGCGAATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTCAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCCGAAATGGCTAATGATTTCACCAGATTAGGCTTCCTGACACCAGGGACTGATGTCAATCCCATAATTCCTGCATTGGAAGCAATTTGGCAGAACTCTGCCGGAAAAGGACTCTCAGATTTCAATTTTCGTAGCGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTTGTAATTCGATCCTTATTGACCCAAGAAGGCATCTGTTTTACGCTGAAACCTGACTTCAAATTTCTTGAGGTTGCCTATCCTTATGTGGCTAAGCGACTACTGACTGACCCTAATCCAGCTCTACGTGAACGTCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCGAAAATGAGTAACAATCCAGCATTGAAAGTGAAAGACACGCAAATCCAGAAAGTTGAAAGAAAATTGGACCTCACTGACACAATCAAAGATGGAGCTCGCCTTTTCTTTGTCGATGAAGGGATACGTAGACAACTTTTTCTTGCTTTGACTGAGGATTCAAAGCTTCATATTGAAGAGCTTGTTGATGTGTATAGGTTGGTTGAAGATCAGATAGACGTCCCTTCTGTGGCCGTAGAAGTAGCTAGAGACTTACCAACAGTTGTCAGGGATCTCCTACTTTCATGGAGTGAGTCAATCTTGTCTGATAGATAG 1980 0.45 MDSIYASSSCTVPHLLRRDTRLLPPRTLDSIAPSSLRRAKKAQRLRVSSSAATNGAVSRSLQGVSSSALEQLDIERGVCIPFRKYSPEIVRNKVLESRGSTLSLMLRGVEIVWNLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQIAFRIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKQFSGPRVLVMEWIDGIRCTNPQAIKEAGLDVDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLTPGTDVNPIIPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSNNPALKVKDTQIQKVERKLDLTDTIKDGARLFFVDEGIRRQLFLALTEDSKLHIEELVDVYRLVEDQIDVPSVAVEVARDLPTVVRDLLLSWSESILSDR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0602 659 ProSiteProfiles Protein kinase domain profile. 208 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0602 659 CDD ABC1_ADCK3-like 178 424 - -
Pvu1g0602 659 Gene3D Transferase(Phosphotransferase) domain 1 205 406 - -
Pvu1g0602 659 SUPERFAMILY Protein kinase-like (PK-like) 179 417 IPR011009 -
Pvu1g0602 659 Pfam ABC1 atypical kinase-like domain 178 422 IPR004147 -
Pvu1g0602 659 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 43 659 - -
Pvu1g0602 659 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 43 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0602 Pvu-Chr1 6918727 6928870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0602 - - gmx:100819754 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0602 1 6918727 6928870 Pvu1g0602 1 6918727 6928870 ECH
Pvu9g1452 9 20596492 20608071 Pvu1g0602 1 6918727 6928870 PCT