Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0599 ATGAGTTTCAAAAGCTCTTCTCTTCTATGCATAGCATTTTTGCTTGCTTTTTCTTCTGCCGTTTATGGCTTCGACATCACAAAGATGCTAGAAAAAGAACCAGAATTGTCCTCCTTCAATAAGTACATCACCGAAGCCAAGCTTGCAGACCAAATAAACAGCCGCAACACCATCACCGTCCTCGCCGTGGGTAACGACGCCATCTCTTCCATTGCCGGAAAGTCCCCGGAACTCATCAAGGCCATCATCAGCACCCACGTCATCCTTGACTACTATGACGAGAAGAAGCTCGTGGAAGCTCAAGCCAGCACCCCTCAACTCACCACGCTCTTCCAGTCCTCCGGCAACGCCGTCAAGGAACAGGGTTTCGTCAAAGTTTCACTCATCGGCGAGGGCGAAATCGCCTTCAGTTCCGTCGGCTCCTCCGACTACTCCGAGCTCGTCAAACCCATCGCCAGCGAGCCCTACAACATCTCCATTCTTCAGGTCACCAAGCCCATCATTCCCCCAGGCCTTGATTCTCAAACTGCACAATCGCCACAACAAGCCAAAGCTTCTCCACCCACATCCTCAAAGACTGCCAAGGCACCAGCTCCTTCAAAGACTGCAAAGGCTCCTTCTCCGGCAAAATCTTCTGAGGCACCAGCTCCTTCCGACGCTGCGGCTGCACCTTCACCTAGTGAAACCGTTGCCGAGTCCCCCTTGGGTGGTTCTGATGCCCCAGCAACCGCTGCTGAAGGTCCCGCAGCTGATGACGGTGATGCTGCAAGTGACTCTAGCAGCTCTTCAACCGTTAAGATGGGTTTGGTTGCAGTGATGGCCTTAGCTTCCCTCTTCATCGTTTCTTAA 849 0.5265 MSFKSSSLLCIAFLLAFSSAVYGFDITKMLEKEPELSSFNKYITEAKLADQINSRNTITVLAVGNDAISSIAGKSPELIKAIISTHVILDYYDEKKLVEAQASTPQLTTLFQSSGNAVKEQGFVKVSLIGEGEIAFSSVGSSDYSELVKPIASEPYNISILQVTKPIIPPGLDSQTAQSPQQAKASPPTSSKTAKAPAPSKTAKAPSPAKSSEAPAPSDAAAAPSPSETVAESPLGGSDAPATAAEGPAADDGDAASDSSSSSTVKMGLVAVMALASLFIVS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0599 282 Pfam Fasciclin domain 35 109 IPR000782 -
Pvu1g0599 282 MobiDBLite consensus disorder prediction 171 264 - -
Pvu1g0599 282 Gene3D FAS1 domain 24 152 IPR036378 -
Pvu1g0599 282 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 251 - -
Pvu1g0599 282 ProSiteProfiles FAS1/BIgH3 domain profile. 23 152 IPR000782 -
Pvu1g0599 282 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 251 IPR033254 -
Pvu1g0599 282 MobiDBLite consensus disorder prediction 171 197 - -
Pvu1g0599 282 SUPERFAMILY FAS1 domain 30 170 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0599 Pvu-Chr1 6834964 6836129 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0599 - - pvu:PHAVU_001G058300g 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0599 1 6834964 6836129 Pvu1g0599 1 6834964 6836129 ECH