Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0577 GAGCTCAATAGAAGTGCATCTGCATCTTCTACTAGAAGTAAAAATGCTCCAGGAAATAGAACTGATGTTGGATGGAAGCATGGGATAGATATTAATGGCAATGGTAAAAAAGTGAAGTGTAGTTATTGTTCAAAGACTATGAGTGGAGGAATATTCAGGTTCAAACATCATCTTGCTGGAACTAGGGAGGACTCTGAACCTTGTTGTTCTGTTCCAGAAGAAATAAGAGATTTGATGATAAAAATTGTTGCAGAAGCTAAGCAAGCCTCTTTGAAAAAAAGAAAGTTAAATATAATTGATGAAGACCAAGGATGTGAGGGGCTTGAAGAAAGACAACATATATTTGGTTCTAAAGGAAAAGAAAAAGTTGGTAGTAGGGGGGCAGTTCAAGCTACCATAAATCAAATGATGAAGAAAGGTTATAAAGAAGAAGTGGATGCTCAAGTTGCTGAATTTTTTTACACAAGTGCCATTCCGTTTAATGTAATTAAAAATCCAGCTTTTACAAAGATGTGTGAAATGATTGGAAAATATGGAGCTGGCTATAAACCTCCATCTTATCATGATATTAGAGAAAAACTATTGAAGCAAGCAATTGACAAAACTGATTTAGTGCTTCAAGAATACAAGGAAGAGTGGAAGAAAACAGGTTGCACAATCATGTCTGATGGGTGGACAGATAAAAAGAGGCGTTCTATTTGCAACTTCTTGGTAAATAGTCCTAAAGGAACTGTTTTTATGTATTCATTGGACACCTCGGACATATCAAAAACTGCAGATAAAGTTTTTAAGATGCTGGATGATGTTGTTGAATTAGTTGGAGAAGAAAATGTGGTACAAGTGGTGACTGATAATGCTGCAAATTTCAAGGCAGCTGGAGAGTTGTTGATGCAAAAAAGGGAGCATTTGTATTGGACCCCATGTGCTGCCCACTGCATTGATTTGAGTTTTGAAGATTTTGAAAAGAAGTTGAAGGTCCATGAGCTTACTATCAAGAAAGGAAGAAAGATCACCACTTATATTTATGGCAGATCAATGCTAATCAGCATGTTGAAGAAGTTCACAAAAGAAAGAGACTTGATAAGACCGGGTGTAACTAGATTTGCCACCGCTTATTTAACTCTAGGTTGTCTTCATGAACTGAAAGCCTCATTATTGACCATGTTCAGTTCTGAAGAATGGAAAACAAGTAAATTTGGAACTTCACAAGAGGGGAAAAAGGTTGAAAATATGATATTAGACAACCGATTTTGGAAGAATATCTCCACGTGCCTCAAAGTTGCTGCCCCTCTTATGGTGGTCCTAAGATTGGTGGATTCAGATGCAAAACCTGCAATGGGTTTCATATATGAAGAGATGGATCGTGCAAAGGAGAAGATTAAGAACAATTTTAATCATATTAAGAAAAGCTATGAAGAGGTTTGGAAAATAATTGATGCACGATGGGATAATCAACTTCATAGGCCTCTGCATGCAGCTGCATACTATCTTAATCCACAATTCCATTATGAACCTGAGTTTAGATCTGATGATCCTGAGGTGAAAGAAGGCTTGTATACATCCATGAGAAGATTGGTTAAGGATGCTGCTGAAAGAAGGATAATTAATGTGCAACTTGTTGAGTATCATTTTGGTAGAGGAGCCTTTGCAATGGATGACGCAAAGGAAAGTAGAAAAACAATACTTCCTGGAGAATGGTGGGAGATGTTTGGGTATAGAACTCCTGAGTTGAAGAGAAGAAACCATTTGCATCAGAAAAAGATGAATGATTTGTTGTATGTCATGTACAACTTGAAGTTGAGTAATAAGCAAATTAGAAAAACAGTTGCTCTTCCCTTTGATGATATTCAATCAGATGATGAATGGATAACTGAAGAGGGAGATAATATTGATGAGATTGATCAAGTTCAAGATGCAAATGTTCACTTAAATCCGGCAATAACAGTTCCAACTCTAGATGCATTTGATCTTGAAAATTTGACTTTGATGTCAATGTGGATGAAGATGAAGATGAAGATGGAGATGATGATGGAGATGATGATGGAGATGATGGAGGAGAGGATATCATTAGAGGATTGGACATGGAAATTTGAATTTCTAATTATTTAA 2109 0.3646 ELNRSASASSTRSKNAPGNRTDVGWKHGIDINGNGKKVKCSYCSKTMSGGIFRFKHHLAGTREDSEPCCSVPEEIRDLMIKIVAEAKQASLKKRKLNIIDEDQGCEGLEERQHIFGSKGKEKVGSRGAVQATINQMMKKGYKEEVDAQVAEFFYTSAIPFNVIKNPAFTKMCEMIGKYGAGYKPPSYHDIREKLLKQAIDKTDLVLQEYKEEWKKTGCTIMSDGWTDKKRRSICNFLVNSPKGTVFMYSLDTSDISKTADKVFKMLDDVVELVGEENVVQVVTDNAANFKAAGELLMQKREHLYWTPCAAHCIDLSFEDFEKKLKVHELTIKKGRKITTYIYGRSMLISMLKKFTKERDLIRPGVTRFATAYLTLGCLHELKASLLTMFSSEEWKTSKFGTSQEGKKVENMILDNRFWKNISTCLKVAAPLMVVLRLVDSDAKPAMGFIYEEMDRAKEKIKNNFNHIKKSYEEVWKIIDARWDNQLHRPLHAAAYYLNPQFHYEPEFRSDDPEVKEGLYTSMRRLVKDAAERRIINVQLVEYHFGRGAFAMDDAKESRKTILPGEWWEMFGYRTPELKRRNHLHQKKMNDLLYVMYNLKLSNKQIRKTVALPFDDIQSDDEWITEEGDNIDEIDQVQDANVHLNPAITVPTLDAFDLENLTLMSMWMKMKMKMEMMMEMMMEMMEERISLEDWTWKFEFLII* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0577 702 PANTHER OSJNBA0013A04.12 PROTEIN 28 83 - -
Pvu1g0577 702 PANTHER OSJNBA0013A04.12 PROTEIN 141 578 - -
Pvu1g0577 702 SUPERFAMILY Ribonuclease H-like 207 600 IPR012337 -
Pvu1g0577 702 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 141 578 - -
Pvu1g0577 702 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 28 83 - -
Pvu1g0577 702 MobiDBLite consensus disorder prediction 1 27 - -
Pvu1g0577 702 ProSiteProfiles Zinc finger BED-type profile. 19 75 IPR003656 GO:0003677
Pvu1g0577 702 Pfam Protein of unknown function (DUF 659) 185 337 IPR007021 -
Pvu1g0577 702 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0577 Pvu-Chr1 6608639 6611017 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0577 - - pvu:PHAVU_008G146100g 1042.34