Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0571 ATGAGGCCGCAATCATCGTCTTTGAATCCGTATGCAGCCTCATATGTTCCTCTCTCTAAAAGGGGGGCAGATGGTAGAACTACTTTTACAGAAAAAGATTCCAAGAATTATGATGGAAGTGTTTGGTTTCAGACTCGTCAGGATGCCACAAATGATCAGCAACTTATCAATTCTAGTTCAGAAAGGCTTTTTACCCCTGAAGCTTTTCCAACAAAAAACCAGCTTGCCTCAAGTTCTTACACATCATCGTCTCAGAATGTGGCAGAGGTGGCGGAAAATCAGCTGCTAGCCGAAGATCTGGATATGGATTTGGAATATCTTAGGATAACATTTCCTGGCATATCTTATCAGTCCCTTGTAGATGTCTATAATGTAAACAGTGGAGACTTGGATGCTGCTATTGACATGCTCAGTCAACTCGAGTTAGAGGGTGATGAATCTTCTGGAACTCTTCCAGAGACACTTGATATTGGTGATGTTTCAGAATCTGGATTAGCAGCTGAATCTACTTCCTTAAAACAGAAGAATGTAGCAGAGGAAACCAGCACTTCGTCTAGTCACATGGCATCAGGCGATGTCTTATGA 585 0.4205 MRPQSSSLNPYAASYVPLSKRGADGRTTFTEKDSKNYDGSVWFQTRQDATNDQQLINSSSERLFTPEAFPTKNQLASSSYTSSSQNVAEVAENQLLAEDLDMDLEYLRITFPGISYQSLVDVYNVNSGDLDAAIDMLSQLELEGDESSGTLPETLDIGDVSESGLAAESTSLKQKNVAEETSTSSSHMASGDVL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0571 194 ProSiteProfiles CUE domain profile. 99 142 IPR003892 GO:0043130
Pvu1g0571 194 MobiDBLite consensus disorder prediction 167 194 - -
Pvu1g0571 194 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 188 IPR038981 -
Pvu1g0571 194 CDD CUE_CID7_like 101 143 IPR041806 -
Pvu1g0571 194 Gene3D - 81 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0571 Pvu-Chr1 6498569 6501022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0571 - - gmx:100781938 294.278