Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0567 ATGGCCTCCATGAATTTATTCACCACCATTCCCCTCACCGCCGACGGCCGGAATCCAACCGCCTATTTTCCCCGGAGGCGGACCAACTCCGTCGCTCTCGCCGCCACTTCGCAGGAATCTCCTCCGGAAATAGAGCTGGAGTTCATCGCGCCGAAAGCGGAGAGTGAGGGGAGGTATGCGGTGGAGAAAGCAAAAGCGATAAGCGGAGAGAAGCTGTTGAGGAACATCATGTCCGATAACAAGATCGAGCTTTACGCCACCTATGGGAAACTGATGAATTGTGGAGGAGGTGGTAGCTGTGGAACTTGCATCGTAGAGATTATTGAAGGAAAAGATCTTTTAAATGAAAGAACCAATACTGAACTCAGATATCTTAAGAAGAAACCTGAATCTTGGAGGCTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTCTGGCAAGGTTGTTGTTCAAAGGATTCCTCAGTGGAAGAAGTAA 480 0.4813 MASMNLFTTIPLTADGRNPTAYFPRRRTNSVALAATSQESPPEIELEFIAPKAESEGRYAVEKAKAISGEKLLRNIMSDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0567 159 SUPERFAMILY 2Fe-2S ferredoxin-like 72 142 IPR036010 GO:0051536
Pvu1g0567 159 Gene3D - 51 158 IPR012675 -
Pvu1g0567 159 PANTHER FERREDOXIN/ADRENODOXIN 32 158 IPR001055 GO:0051537|GO:0140647
Pvu1g0567 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 140 IPR001041 GO:0051536
Pvu1g0567 159 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 32 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0567 Pvu-Chr1 6440993 6444410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0567 - - gmx:100807125 266.159