Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0562 ATGACAAGTGATCAGGGTTTGAGGATTCCATGTCTGGATTTTTCTGGAGTGGAGTTGGGAATGAAAGAGGGTAGTGAGGAATGGAGAGAGATGAGCAAGAAAGTGAGGGATGCTTGTGAGAGCCATGGTTGCTTCATCATGGTTTATGATAAGGTTTCAAAGGGTCTACATGATGACATGTTTTTATGCATGAAAGAGGTGTTTGATTTGCCTGAAGAAACAAAGAGGAAGTACAGCAGCACCAAGCCTTATAGGGGTTACATTTGTGAGTATCCAGTTTTTCCTAGTCAAAGTTTTGGAATTGATGATGCTCCTCTACCTCAAACATCTCAGGCTTTCACTAACCTCATGTGGCCACAAGGAAACCCTACTTTCTGTGAGACGTTGAACTCGATGAGCTCCAAGCTGCTTGATCTGAGTTTGGAGATTCTGAAGATGATTGTGGAGGGATATGGACTTCCAAAGGAATACAGTTCGGAGATTGAGGAGTTGAAGAGTTGTAGTATTTTCCGTTTGATCAAGTACAAAGTTGATGAAAATGGTGAAGTTTGTGAACCTGCACTGTTGCCTCACAGACAAAAGTGCCTTAACCATTTTGTGCGAAAACCAAGCGGGAGGGTCTTGAGGTGCTGA 633 0.4297 MTSDQGLRIPCLDFSGVELGMKEGSEEWREMSKKVRDACESHGCFIMVYDKVSKGLHDDMFLCMKEVFDLPEETKRKYSSTKPYRGYICEYPVFPSQSFGIDDAPLPQTSQAFTNLMWPQGNPTFCETLNSMSSKLLDLSLEILKMIVEGYGLPKEYSSEIEELKSCSIFRLIKYKVDENGEVCEPALLPHRQKCLNHFVRKPSGRVLRC* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0562 210 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Pvu1g0562 210 Gene3D - 1 194 IPR027443 -
Pvu1g0562 210 SUPERFAMILY Clavaminate synthase-like 6 182 - -
Pvu1g0562 210 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 196 - -
Pvu1g0562 210 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 5 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0562 Pvu-Chr1 6357288 6358837 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0562 - - pvu:PHAVU_001G054900g 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0562 1 6357288 6358837 Pvu9g0993 9 14889584 14889943 PCT