Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0561 ATGACAAGTGAGGGTTTGAGGATTCCATGTCTGGAGTTTTCTGGAGTGGAGTTGGGAAAGAAAGAGGGTAGTGAGGAATGGAGAGAGATGAGCAAGAAAGTGAGGGATGCTTGTGAGAGCCATGGTTGCTTCATCATGGTTTATGATGATAAGGTTTCAAAGGGTCTAAGAGATGACATGTTTTTATGCATGAAAGAGGTGTTTGATTTGCCTGAAGAAACAAAGAAGAAGTACATAAGCTCCAAGCCCTATAGGGGTTACAATAGTGAATGTCCATTTATTCCTCTCAGTCAAAGTTTTGGAATTGATGATGCTCCTTTACCTCAAACATCTCAGGCCTTCACTAACCTCATGTGGCCTCAGGGAAACCCTACTTTCTGTGAGACATTGAACTCGATGAGCTCCAAGCTGCTTGATCTGAGTTTAGAGGTTCTGAAGATGATTGTGGAGGGTTATGGGCTTCCCAAGGAATACAGTTCGGAGATTCAGGAGTTGCAGAGTTGTAGTAATTTTCGTTTGATGAAGTACAAAGTTGGCCAAAATAGTGAAGTTTGTGAAACTGGACTGTTGCCTCACACAGACAAAAGTGCCTTAACCATTTTGTGCGAATTCCAAGTGGAGGGTCTAGAGGTGCTGACCAAATCAAACCAATGGGTTCCAGTGAAGATACCCCAGGAGGGTTTTGTGGTCATCGTTGGTGACGTATTGAAGGCATGGAGCAATGGGAGACTTCATTCTGCCACACACAGAGTTATGATGAAAGAAGGAAAAGAGAGATACTCGATTGCACTATTTGGAGTGCCAAAAGAGGAGACGAAGATTGAGGTGCCTGCTGAGTTGGTGGAAGACAACATTCACCCTCTTCGTTACAGGCCATTCACTTATGGAGATTACTTCAAATACTTTGTTTCTACTCTCCATCACAATGCTTTAGATGTCTTTGCTGGTGTTTCATAA 957 0.4305 MTSEGLRIPCLEFSGVELGKKEGSEEWREMSKKVRDACESHGCFIMVYDDKVSKGLRDDMFLCMKEVFDLPEETKKKYISSKPYRGYNSECPFIPLSQSFGIDDAPLPQTSQAFTNLMWPQGNPTFCETLNSMSSKLLDLSLEVLKMIVEGYGLPKEYSSEIQELQSCSNFRLMKYKVGQNSEVCETGLLPHTDKSALTILCEFQVEGLEVLTKSNQWVPVKIPQEGFVVIVGDVLKAWSNGRLHSATHRVMMKEGKERYSIALFGVPKEETKIEVPAELVEDNIHPLRYRPFTYGDYFKYFVSTLHHNALDVFAGVS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0561 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 88 IPR026992 -
Pvu1g0561 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 268 IPR005123 -
Pvu1g0561 318 SUPERFAMILY Clavaminate synthase-like 5 307 - -
Pvu1g0561 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 316 - -
Pvu1g0561 318 Pfam 2OG-Fe(II) oxygenase superfamily 176 265 IPR044861 -
Pvu1g0561 318 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 316 - -
Pvu1g0561 318 Gene3D - 7 314 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0561 Pvu-Chr1 6335261 6338062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0561 6 298 Glycosyltransferase AT5G59530 25.000 9.09e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0561 - - gmx:100817159 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0561 1 6335261 6338062 Pvu1g0561 1 6335261 6338062 ECH
Pvu1g0561 1 6335261 6338062 Pvu9g0992 9 14877963 14879306 PCT