Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0559 ATGGGTTCTTGCAAACCCCAACAAGAGCATGTTCATGGGCCTATCATCATAGGTGCCGGACCTTCAGGCCTAGCCGTGGCTGCTTGTCTCTCAGAGCACAAAGTCCCTTTCGTGATTCTTGAGAGAAGCAACTGCATAGCCTCTCTTTGGCAAAACAAAACCTACGACCGTCTCAAACTCCACCTCCCAAAGCAGTTCTGTGAGCTTCCCTTGAAGGGTTTTCCCCACACTTTCCCCAAGTACCCCACAAAGTACCAGTTCATATCCTACATGGAGTCCTATGCTTCACACTTCAACATCCACCCCAGGTTCAACCAAATTGTGGAGTGTGCTGAGTTTCATAAAGGGTCACAGCTTTGGGTGGTTAGGACTCAGGAGTGTGAGTTTGTGTCTCCCTGGCTTGTGGTGGCCACTGGAGAGAATGCTGAGCCTGTGCTTCCTCGAATTCATGGAATGGACCATTTTTCTGGCTCCATTGCTCACACTAGTGTCTACAAGTCTGGCTCTGAGTACAGAAACAAGAAGGTTTTGGTCATTGGGTGTGGCAATTCAGGAATGGAAGTTAGTTTGGACCTTTGCAGACACAATGCCTCACCTTACATGGTTGCAAGAAATACAGTGCATGTGCTTCCTAGGGAGATGTTTGGATTCTCAACTTTTGGCATAGCCATGGCTCTTTACAAGTTGTTTCCAATCAAGATTGTAGACAAAATTCTCTTGCTTGTGACCAACTTCATGTTGGGAAACACCAATGACTATGGCATCAAAAGGCCAAAAACAGGCCCAATAGAGCTCAAATTAGCCACAGGGAAAACCCCAGTTCTTGATGTGGGTCAAGTGGCACAAATCAAATGTGGCAACATTAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAAAGGTGCCAAATTTATGGATGGACAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGGTACAAAAGCAACGTGCCTACTTGGCTCAAGGGTTCTGATTTTTTCACGGAGGATGGAATGCCGAAAACGCCCTTTCCCCATGGGTGGAAAGGGGAGCAGGGATTGTATACGGTGGGGTTCACCAGAAGAGGAATACAAGGAACATCGTGTGATGCAATCAAGATCGCTGAAGACATTGCCTCACAGTGGAAAACCGTAGAGAACAAGAATCAGTGCAATTCACATGTCATCATTCTCACTTCATAG 1206 0.4635 MGSCKPQQEHVHGPIIIGAGPSGLAVAACLSEHKVPFVILERSNCIASLWQNKTYDRLKLHLPKQFCELPLKGFPHTFPKYPTKYQFISYMESYASHFNIHPRFNQIVECAEFHKGSQLWVVRTQECEFVSPWLVVATGENAEPVLPRIHGMDHFSGSIAHTSVYKSGSEYRNKKVLVIGCGNSGMEVSLDLCRHNASPYMVARNTVHVLPREMFGFSTFGIAMALYKLFPIKIVDKILLLVTNFMLGNTNDYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRKGAKFMDGQEKEFDAIILATGYKSNVPTWLKGSDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGIQGTSCDAIKIAEDIASQWKTVENKNQCNSHVIILTS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0559 401 SUPERFAMILY FAD/NAD(P)-binding domain 171 381 IPR036188 -
Pvu1g0559 401 Pfam Flavin-binding monooxygenase-like 16 326 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pvu1g0559 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 14 33 - -
Pvu1g0559 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Pvu1g0559 401 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Pvu1g0559 401 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 10 397 - -
Pvu1g0559 401 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 397 - -
Pvu1g0559 401 SUPERFAMILY FAD/NAD(P)-binding domain 15 207 IPR036188 -
Pvu1g0559 401 Gene3D - 5 386 IPR036188 -
Pvu1g0559 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 13 35 - -
Pvu1g0559 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 132 140 - -
Pvu1g0559 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0559 Pvu-Chr1 6265927 6268478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0559 K11816 - gmx:100798781 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0559 1 6265927 6268478 Pvu9g0989 9 14828182 14830788 PCT