Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0556 ATGGCATCAGAAGTAAGTTACATCTGCAAAAGAACTGTGGTGAGCACCAAGGCAGTGGAACCAGGAAAGTACTTCCCCTTATCAGCTTTGGATCGCTACATGGAGAACAATCACATTAGGCTGGTGTGTTATTACCAGAGTTCAAGAGAAGTAGTGGAGCTTGGAGAAATGAGCAAGAAGTTGAGAGAGAGTTTGTCAGAAATGCTGACTGATTTCCCCATGGTGAGTGGAAGGTTGACAAGAGATGAGAGAGGGCATTGGAAGATAAAGTGCAATGATGCTGGGGTGAGAGTGGTGGAGGCCAAAGCCAAAGGGAGTGTTGAAGGATGGCTAGCAAATCTTGATAGGGAAAAGGAACTCCAACTTGTGCATTGGGAGGAGATGTTCCACAAGCCTTATTATTGGTCCACCTTTTATGTTCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGTGCTCATCTCTTGGCAGATTCCACTTCTGCAATCTCATTCATGAAAGCATGGGCTGATATTTCAAAGGGCAACAAAATACTCACTCCTCCACTGTTCCACCCTTTACCTCTTACAAGAGAACCAAACACAAACCCCAATCATCATCCCCACATGGAGTTAATTCACCACTACAAATCTTTAATTCAAAAACCCATTTCTTTGAAGGAATCAAGGTACACTACCATTTCCATGGGCTTCTCAGCCCACATGGTCCAGGCCTGCATGTCCACGGCCCAACTCAACGGCCCAATAACACCCTTCGCAGCCCTAGCAGCCTTGTTTTGGATCTCTCTGAGCAAAGTCAAGGGCTTCAGAAATGGGCTTGTTGACATGTCCATATGCTTGGACATGAGAAAAGTCTTGGGCCTAGATACTGGGTTCTTTGGAAACTGCATGGTGTATAATAAGGTCCATGAAGTAGAAGGGGGCAATCACAAATTGAATTTTCCAGAAGCTGTTAGGGCAATAAGTGATGTTGTGGCTAAAATGGACTATGAGGGTGTCATGGATTTGATTGAGTGGCTAGAAAATGATGATGTGAATTCACCACCTACCATGATGAATGGTCATGATCTTGTTTGTGCTAGCTTGGAGGGTGTGGACCCTTACTTGACTGTGTTTCAAGATGGGTTCAAACCCATTCATGTTTCTTGTTATGTAGAGCCAGTTTTGGGAGAAGGACAAGTTTTGATACTCCCTGGCCCACCTGGGGAGGGTCCCTTAAGCAGAGTGGCCATGGTGACCATAAGAGAAGAAGAAGCAATTAAACTTTGTGAAGATGAACTTATCTCACAATTCTCTCCCACTACCCTAATGAAATGTTAA 1332 0.4444 MASEVSYICKRTVVSTKAVEPGKYFPLSALDRYMENNHIRLVCYYQSSREVVELGEMSKKLRESLSEMLTDFPMVSGRLTRDERGHWKIKCNDAGVRVVEAKAKGSVEGWLANLDREKELQLVHWEEMFHKPYYWSTFYVQLTEFEEGGLAIGLSCAHLLADSTSAISFMKAWADISKGNKILTPPLFHPLPLTREPNTNPNHHPHMELIHHYKSLIQKPISLKESRYTTISMGFSAHMVQACMSTAQLNGPITPFAALAALFWISLSKVKGFRNGLVDMSICLDMRKVLGLDTGFFGNCMVYNKVHEVEGGNHKLNFPEAVRAISDVVAKMDYEGVMDLIEWLENDDVNSPPTMMNGHDLVCASLEGVDPYLTVFQDGFKPIHVSCYVEPVLGEGQVLILPGPPGEGPLSRVAMVTIREEEAIKLCEDELISQFSPTTLMKC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0556 443 Pfam Transferase family 10 349 - -
Pvu1g0556 443 Gene3D - 2 211 IPR023213 -
Pvu1g0556 443 Gene3D - 213 428 IPR023213 -
Pvu1g0556 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 442 - -
Pvu1g0556 443 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0556 Pvu-Chr1 6211255 6212717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0556 12 403 Acyl Lipid Metabolism Gene Families AT3G23840 26.667 1.95e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0556 - - gmx:100804090 709.909