Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0555 ATGGGTGACAAGAAGAAGAAGGCTCAGATGTTTGTAAAACTAGTTTCTGCTGCTGGCACTGGATTCTTCTATGTTAAGAGGAAGCCAAGGCAATTTACTGAAAAGCTTGAGTTTCGAAAATTTGATCCTAGGGTTAATCGTCATGTACTCTTTACAGAGGCTAAGATGAAGTGA 174 0.3966 MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKFDPRVNRHVLFTEAKMK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0555 57 TIGRFAM rpmG_bact: ribosomal protein bL33 4 57 IPR001705 GO:0003735|GO:0005840|GO:0006412
Pvu1g0555 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Pvu1g0555 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 1 57 - -
Pvu1g0555 57 Gene3D Ribosomal protein L33 3 57 IPR038584 -
Pvu1g0555 57 SUPERFAMILY Zn-binding ribosomal proteins 4 55 IPR011332 GO:0006412
Pvu1g0555 57 Pfam Ribosomal protein L33 12 55 IPR001705 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0555 Pvu-Chr1 6208888 6210122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0555 K02913 - gmx:100811038 116.701