Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0543 ATGAAGGGAAGCTTCATATTTCTGTCGGTGCTCCTGTGTTCCACCTTTCATGTCTCCTTCTCCATTATCGATGGACTGGTGGCGAACGGGAACTTCGAGCTGGGTCCGAAGGCGTCGGATCTGAAAGGGACGGTGGTGGTGGGAGGAAGCAAGTCGATTCCGGAGTGGGAGATATCGGGTTTCGTGGAGTACATAAAGTCGGGGCAGAAGCAGGGGGACATGCTGCTGGTGGTGCCGGAGGGGGCGTATGCGGTGCGGCTGGGGAACGAGGCGTCGATAAAGCAGACATTGAAGGTGATGAAGGGGATGTACTACTCGATCACGTTCATGGTGGCTCGGACGTGCGCGCAGGAGGAGAGAATAAACATCTCGGTGACGCCGGACTGGGGCGTGATTCCGATCCAGACGCTGTACACGAGCAGCGGGTGGGACCCCATCGCGTTCGGGTTCAGAGCAGAGAGCGAGACGGTGGAGATGCTCATTCATAACCCTGGCAAGGAGGAGGACCCCGCCTGTGGGCCCCTCATTGATTCTGTTGCTCTCAGAACTCTCTACCCTCCCAAAGCTACTAACCAGAACTTATTGAAGAATGGTGGGTTTGAAGAAGGACCCTATGTGTTCCCCAACTCATCATGGGGTGTGATCATCCCACCCAACATTGAGGATGACCACTCTCCCCTCCCAGGGTGGATGGTGGAGTCCCTAAAGGCAGTGAAGTACATAGACTCAGACCATTTCTCAGTCCCTCAAGGCAAAAGAGCAGTGGAGCTAATAGCAGGAAAAGAGAGTGCCATTGCTCAAGTGGCCAGAACCATCCCTGGCAAAACCTACGTGCTCTCATTCTCTGTAGGGGATGCCAGCAACTACTGTGAAGGGTCCATGATTGTGGAAGCATTTGCAGGCAAAGACACTATCAAAGTGCCCTATGAGTCCAAAGGCAAAGGAGGGTTCAAACGTGCAGCCCTCAAGTTTGTGGCTGTTGGACCAAGAACAAGAGTCATGTTCCTCAGCACTTTTTACACTATGAGAAGTGATGACTTCTCTTCACTCTGTGGACCTGTGGTTGATGATGTCAAGTTGGTAAGCCTGCGTAAACCATAA 1101 0.5304 MKGSFIFLSVLLCSTFHVSFSIIDGLVANGNFELGPKASDLKGTVVVGGSKSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQTLKVMKGMYYSITFMVARTCAQEERINISVTPDWGVIPIQTLYTSSGWDPIAFGFRAESETVEMLIHNPGKEEDPACGPLIDSVALRTLYPPKATNQNLLKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSDHFSVPQGKRAVELIAGKESAIAQVARTIPGKTYVLSFSVGDASNYCEGSMIVEAFAGKDTIKVPYESKGKGGFKRAALKFVAVGPRTRVMFLSTFYTMRSDDFSSLCGPVVDDVKLVSLRKP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0543 366 Gene3D - 188 362 - -
Pvu1g0543 366 Gene3D - 24 182 - -
Pvu1g0543 366 PANTHER OS02G0527500 PROTEIN-RELATED 6 366 - -
Pvu1g0543 366 PANTHER PLANT/F18G18-200 PROTEIN 6 366 - -
Pvu1g0543 366 Pfam Protein of unknown function (DUF642) 193 360 IPR006946 -
Pvu1g0543 366 Pfam Protein of unknown function (DUF642) 25 182 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0543 Pvu-Chr1 6061570 6067416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0543 - - gmx:100813910 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0543 1 6061570 6067416 Pvu1g0543 1 6061570 6067416 ECH