Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0538 ATGGAGAGGATTCACGTCAGCGTCCGAGCAAAGCCTCTCTCCCAAGATGATGCCAAAACAACTCCCTGGAGAATCTTCGGCAACTCCATCGCCATTCCCAACCTCTCCAAATTTGATTTTGACCAAATATTCAGCGATAGTTCTGCAACCGCGCAAGTCTACGAAGCTCGCACCAAGGATATCGTGGAGGCCGCAGTTCGGGGATTCAACGGCACTGTCTTCGCTTACGGCCAGACGAATAGTGGGAAGACTTTCACGATGCGAGGCTCGAAAGCTGAACCTGGAGTCATTCCTCTCGCTGTTAACGATTTGTTTCGAATCATTCAACAAGACGTTGATCGAGAATTTCTTCTTAGAATGTCATACATGGAGATTTATAATGAAGAGATAAATGATTTGTTGGCTCCTGAACATCGAAAGCTGCAGATTCATGAAAATCTAGAGCGTGGGATATATGTTGCGGGGTTGCGAGAAGAAATTGTTGCCTCTCCTGAGCAAGTCCTTAATCTCATGGAGTTTGGAGAATCTCATAGACATATTGGAGAGACAAATATGAATTTGTACAGTAGTAGGTCCCATACTATTTTCCGCATGATAATTGAGAGTAGGGACAGAAGCGAAGATGAAGATAGTGGCAGCTCTTGTGATGCTGTCCGTGTATCAGTGTTGAATTTAGTGGATCTTGCTGGGTCAGAGCGTGCTGCAAAAACTGGTGCTGAAGGCGTCCGACTCAAAGAAGGCTCTCACATAAACAAAAGCTTAATGACTTTGGGAACCGTGATTAAAAAATTGAGTGAAGGTGCTGAGAGTCAAGGGGGCCATGTTCCATACCGAGATAGCAAGCTCACTCGAATTTTGCAACCTTCTTTAGGAGGAAATGCTAAAACCGCTATAATATGTAATATTACCCTTGCGCAGATACATACAGATGAAACTAAAAGCAGTCTTCAATTTGCAAGTAGAGCATTGCGTGTCACAAATTGTGCTCAAGTGAATGAGATTTTGACCGATGCTGCTTTATTAAAGCGCCAAAAGAAGGAGATTGAAGATCTTCGTGCCAAATTGATGGGTTCTCATTCAGGGCATTTGGAAAAGGAGATTCTGAGCCTTCGAAATACATTATTACAGACTGAACTGGAAAGGGAACGCATAGCTTTGGAATTGGAGGAGGAAAAGAAAGCTCAAGCTGAATGGGAAAAAAGAGTAAAGGAACAAGCCAAGAAAATTGAAAATTTGAGTTCAATGGTTCTGTTTTCAAATAGGGATGAAAGTCGTGAGCATATTAAAAGGGACAAGAGGCGGGATACATGGTGTTTTGGAAAACTTTCACAGGAGCATCCAGGAAATGTATACCCTATCATCCCACCTAGTGCTTCTACTGTAAAACCCATAAGACCTAATCGATACATGGGACCACTTCTTCCTTTCGAGGAACTTGTAAATGAAGCTGTTCATGTGGATGAGCCCTTTAAGCAAGATGACAATAATAAAGATGATGCTAACAAGGACTGTAATCTACCAAACCCTTGTGCTTTATTGCATGTGACAAACAGGAAAAAGGCACCATCACGGAAGAAAAGCTTGCCAATGGAGGACCACAAATTTCTAGAATTGCAGGCAGAATATGAGAGTTTGTTTCTAAAATTTGAAACTCAGAGAACTGTAAGTGATATACAGCTGGAATCATTGAGAAAACAGCTAATTGATTCAATTTCTCTCCATCCTAAGGAATCTGTTGAATCTTTAAGTTATGCCTATAATGGTAGCTTGAATGTTGAGAAAAATGCCAATTTTAGAGAATCAGATGCTATTCTTGTTATCAAGAGACTTCAAGAGCAGATCAAGGTTTTGGAAATAGAAAACTTATCAGGCCAACAAAGATTGGATAAAGTTGTTGATCTGGCAACAGAGCAGAATATATGTGCTAGTGAGAAATACAAAGAGATCTATGAAGAGCTTATAAACGCACAACAGGCAGCTCGACTGGCTAATGAACAACTTACTTCCACTAAAACTGTGAGCAACATTAATGATGCAAATTTTGACTTTCTGATCAGTGTTTCCATGGAAATTGAAGAAATTTCATCTGAAATTCAAAAATCAAAAGATGCTGTTCAAAGTGTTATGTTTATGGTGGATGATTCTATTAAAAGTTTCTCTGCTCTCAGTGATACTCTCCTTGTTTTCAAAACCTCAGTATCTGAGGATTCTGCAGACCACATTTTAATCTTGAATAATTCTCTGAATTTGAATTCTTGCCTCAGAAAGAAAATATTTGAGCTTGAGAGTGAGAAGATTCTTCTGGACAACCAGGTAGCTGATCTTCAGAAGCATCTTCAGGAATCAAAATTAGATGCTCAGAATTCCCAAAATTCTTTGATGGAAAATTTAGAACAACAGAAATTTGAAAATGTAGAGTTGATTTCTTATATTCAAACTCTTGAAAAGGATTTATCTTGTTTGACATCATCTACAGTGGCCAAGGAAAGAGAAACTATAAGAAAAGATCTGGAGAAGGCTAAAACCAAGTTTAAAGAAACTGAGTCTAAGCTTAAGATTGCCATACAAGAGAAAACAAAAATTGAGGGTGAGAAAGCCTATGGTGAGCGAGAGATTAAACGATTGCAAGGTCAAATCTCTCTTCTTGAACGTGATTCACTTGCGGCTAGAAGACGTGATTCAATTGTTGAAATGGGTTCAAAGATGTCTTATCCTAAAAGACCGAAGGGTTTAGCATTTTCTCTGGAACAGACAGTACAGGAAGAGCAGAAAAAGCTGGAAGTTATGGCATTTGAATCAGAAACAAGAATTGCTTCATTGGAAGAAAAAATAACAGCTACGTTAAAGGAGAAAGAAGAGGTGATGTCTATTAATGAAGGTTTGATGTTAGAACTTGAAGGCTTGAATGAAACACTGAACACATCAAGCACTGAACTGCATCATTTGAAGGAGGAAATTTATGCTCTTAAACAAAGATTGGAAGAATCTGATATCAACCAAGAAAGTTTGAAAAGCTCTATCAAAGTACTAATGGAAGAAAAGGAAGAGTTGGCTATGCAACTCACTGATTCACTTTTGGAAATAGAGGAGGAAAGGGCTATATGGTCTGCCAAAGAAAAGGCAGCACTTCTAGCTATAGAAGAACAGTCAAAGTCAAACAATGTGCAAATTACATCATTATCAACAAAATTATCGGAAGTAAGGAATGAATTAGAATCTTGTAGAGAAGAATGCAAAATCCTACCGGAAAGATTGACTACTATAGATGAACATTCTCATATCAAGGAAAATTTCAGCTACAACGATAAGGTTTCAGAGTGGGATCAACTGGAAAATCACCTCGAAACAACCAATGCTGAAAGCAAACAATCTCTAGAAATGTCAAAAGCCAATTCAGAAATGCAACCTTTGGAGAATGAGCTGAATGACTGTCCTGCGGAAGAAAAAGAAAATGAAATTCAGAAGGAACTGCATGTTCTTGATAAAGAAGATAATGTATCAAACTCGAACGTGTTTCAGAATCTCAAGTCCAAACTTTCTGATGCGGCAAAAGAAAAAGACATAATGACGATTAAGATGGAAGATCAACAGACAGAATTGGAATTTCTGCGAAAGAATTTCCAGGATGAGTTATCAAAGGGAAAGCTCCAGGTTGAAGAACTAAGTCAGAAACTTTCCAGTATGGAAGTCAAAATGCATGCGGATGGTGTAACAAACAACAAAGAAATGGCTAAGCTCAGAATGAGACTCCGTGGAACACAAGCAAAACTAGATGCTTTCCGTTGTAGATTCAGGGAAGCAATCGATGAATCAATTCAAACAAATAAGAAGTATAAACAGCAGTTGGCTTCAAAAGGAGTAGAAGTGCTTAACCTAATGAAAGAGTTAGCAGCAGTCAAAGGGCATTAG 3909 0.3876 MERIHVSVRAKPLSQDDAKTTPWRIFGNSIAIPNLSKFDFDQIFSDSSATAQVYEARTKDIVEAAVRGFNGTVFAYGQTNSGKTFTMRGSKAEPGVIPLAVNDLFRIIQQDVDREFLLRMSYMEIYNEEINDLLAPEHRKLQIHENLERGIYVAGLREEIVASPEQVLNLMEFGESHRHIGETNMNLYSSRSHTIFRMIIESRDRSEDEDSGSSCDAVRVSVLNLVDLAGSERAAKTGAEGVRLKEGSHINKSLMTLGTVIKKLSEGAESQGGHVPYRDSKLTRILQPSLGGNAKTAIICNITLAQIHTDETKSSLQFASRALRVTNCAQVNEILTDAALLKRQKKEIEDLRAKLMGSHSGHLEKEILSLRNTLLQTELERERIALELEEEKKAQAEWEKRVKEQAKKIENLSSMVLFSNRDESREHIKRDKRRDTWCFGKLSQEHPGNVYPIIPPSASTVKPIRPNRYMGPLLPFEELVNEAVHVDEPFKQDDNNKDDANKDCNLPNPCALLHVTNRKKAPSRKKSLPMEDHKFLELQAEYESLFLKFETQRTVSDIQLESLRKQLIDSISLHPKESVESLSYAYNGSLNVEKNANFRESDAILVIKRLQEQIKVLEIENLSGQQRLDKVVDLATEQNICASEKYKEIYEELINAQQAARLANEQLTSTKTVSNINDANFDFLISVSMEIEEISSEIQKSKDAVQSVMFMVDDSIKSFSALSDTLLVFKTSVSEDSADHILILNNSLNLNSCLRKKIFELESEKILLDNQVADLQKHLQESKLDAQNSQNSLMENLEQQKFENVELISYIQTLEKDLSCLTSSTVAKERETIRKDLEKAKTKFKETESKLKIAIQEKTKIEGEKAYGEREIKRLQGQISLLERDSLAARRRDSIVEMGSKMSYPKRPKGLAFSLEQTVQEEQKKLEVMAFESETRIASLEEKITATLKEKEEVMSINEGLMLELEGLNETLNTSSTELHHLKEEIYALKQRLEESDINQESLKSSIKVLMEEKEELAMQLTDSLLEIEEERAIWSAKEKAALLAIEEQSKSNNVQITSLSTKLSEVRNELESCREECKILPERLTTIDEHSHIKENFSYNDKVSEWDQLENHLETTNAESKQSLEMSKANSEMQPLENELNDCPAEEKENEIQKELHVLDKEDNVSNSNVFQNLKSKLSDAAKEKDIMTIKMEDQQTELEFLRKNFQDELSKGKLQVEELSQKLSSMEVKMHADGVTNNKEMAKLRMRLRGTQAKLDAFRCRFREAIDESIQTNKKYKQQLASKGVEVLNLMKELAAVKGH* 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0538 1302 PANTHER CENTROMERE PROTEIN E 1 705 - -
Pvu1g0538 1302 Coils Coil 331 351 - -
Pvu1g0538 1302 ProSiteProfiles Kinesin motor domain profile. 3 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 Coils Coil 372 415 - -
Pvu1g0538 1302 PRINTS Kinesin heavy chain signature 68 89 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 PRINTS Kinesin heavy chain signature 183 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 PRINTS Kinesin heavy chain signature 222 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 PRINTS Kinesin heavy chain signature 275 296 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 PANTHER KINESIN-LIKE PROTEIN KIN-7O 1 705 - -
Pvu1g0538 1302 Coils Coil 965 1031 - -
Pvu1g0538 1302 Coils Coil 646 666 - -
Pvu1g0538 1302 Coils Coil 1186 1224 - -
Pvu1g0538 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 356 IPR027417 -
Pvu1g0538 1302 Coils Coil 830 857 - -
Pvu1g0538 1302 Coils Coil 872 892 - -
Pvu1g0538 1302 Coils Coil 1057 1077 - -
Pvu1g0538 1302 Coils Coil 607 627 - -
Pvu1g0538 1302 SMART kinesin_4 1 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 ProSitePatterns Kinesin motor domain signature. 221 232 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu1g0538 1302 Pfam Kinesin motor domain 36 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0538 1302 CDD KISc_CENP_E 4 325 - -
Pvu1g0538 1302 Gene3D Kinesin motor domain 1 356 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0538 Pvu-Chr1 5988427 6017916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0538 4 422 Miscellaneous Gene Families AT2G21380 44.522 5.13e-98 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0538 K11498 - gmx:100813718 2003.41