Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0535 ATGGCTTCAATTCAACCCAACAACTTTTCCTACCCACGTTTCCCTCCTCCTCCACCGCCGCCACCACCACCACCACCACCACCCCCGCATTCATTTCCTCCTCCTCCTCCATCACCATTTGGATCGCCGCCGCCACCTCATCAATTTTCTCCTCCACCCCCAAAGGTGCGGCCACCGCCGCCACCTCGTCCCATTCGTCCTTCTCCACCGCCACCACCTCGCCCGGTTCGTCCTCCCCCTGCCCCTCTTCCACCTTCACCCTCTCCAAGCAACCCCACAGTCATAATAGTCGTGGTTGTCTCACTGGGTGGCCTCTTGCTCCTCTCAATGCTTGCTTTTGCTCTGTTCTGCTGCGTTCAGAGGAAGAAGAAGAAGACGACGCAAGAAACCGATGTTATTCACTTTGATGAGCACAGAAGGGTAAACGAAACCATCGTGCCTGGTCCTTTCGGACGTAACACAGTGGTGGTAACTGTTGAAGATGATGTGCATATCGATGAAGAAATCATCAAGAGTGAGAAAGTTGGTCACAATTTGCATGCAAAATCATCTTCTCCACCTGAAGCAGATCAAGGTTCTTCTAGCAGCATTGCTCAGGTGGCAGATACTCATCCTTCTGCACCTCAACATCACGATGGTGATCATCACCAGCTTGAAAACAAGCCATGA 669 0.5232 MASIQPNNFSYPRFPPPPPPPPPPPPPPPHSFPPPPPSPFGSPPPPHQFSPPPPKVRPPPPPRPIRPSPPPPPRPVRPPPAPLPPSPSPSNPTVIIVVVVSLGGLLLLSMLAFALFCCVQRKKKKTTQETDVIHFDEHRRVNETIVPGPFGRNTVVVTVEDDVHIDEEIIKSEKVGHNLHAKSSSPPEADQGSSSSIAQVADTHPSAPQHHDGDHHQLENKP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0535 222 MobiDBLite consensus disorder prediction 1 88 - -
Pvu1g0535 222 MobiDBLite consensus disorder prediction 207 222 - -
Pvu1g0535 222 MobiDBLite consensus disorder prediction 174 222 - -
Pvu1g0535 222 MobiDBLite consensus disorder prediction 184 203 - -
Pvu1g0535 222 PANTHER OS08G0108300 PROTEIN 1 201 - -
Pvu1g0535 222 PANTHER OS08G0108300 PROTEIN 1 201 IPR044950 GO:0009834
Pvu1g0535 222 PRINTS Proline rich extensin signature 12 28 - -
Pvu1g0535 222 PRINTS Proline rich extensin signature 34 46 - -
Pvu1g0535 222 PRINTS Proline rich extensin signature 51 72 - -
Pvu1g0535 222 MobiDBLite consensus disorder prediction 10 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0535 Pvu-Chr1 5940559 5941451 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0535 - - gmx:100788862 170.244