Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0532 ATGGGTGGGAGAGGGATCAAGCTCTTTGATGAAGAAAGGAATGGTCTTTTTTCAATTTCCAATTTTGGGTCTCAATGGGGTGGCGGTATTCACGACCCTGCGGCTATTGCTATGTTTGCCAGCGTTAGTCAAATGGGAATGGGGTTTGGCGTTCAAGAGCCAAACCCTCCTTCTGGTGATTCCCAGCACAATGGTGGCATGAACATTAGGATCCCTTGTACTGAGTTGTACGTTAGGTATGTTCAATCAGAGGGGAAGGTGAAGATTACTGGGGTTTCTGAGGAAGAAGAGGGGGTGGCGGGTGTTAAGGGGAAGAAAAAGGGTGTCTTTAAAGGGTTGAGGATCAAGGTGAAGAACCCTTCTCTTAGGAGGTTGATTAGTGGTGCCTTTGCTGGGGCAGTGTCACGGACCACTGTGGCACCCTTGGAGACCATTAGGACTCATTTGATGGTAGGAAGTAGTGGGAATTCTACTGGGGAGGTGTTCAACAATATCATGAAGACTGATGGATGGAAGGGTTTGTTTAGGGGTAATTTTGTTAATGTGATTCGGGTTGCACCGAGCAAGGCCATTGAGCTATTTGCATATGATACTGTAAACAAGAACCTCTCAGCAAAGCAAGGGGAGCAGCCTAAACTCCCTATTCCTCCATCATTGATTGCAGGTGCTTGTGCTGGAGTTACTTCAACGATATGCACATATCCTCTGGAGTTACTAAAGACTCGACTAACAATCCAGAGGGGTGTTTATGATGGTCTGCTAGATGCATTCCTGAAAATAGTGAGAGAAGAGGGTGCTGGAGAACTTTACAGAGGTCTCACTCCAAGCCTTATTGGAGTAATACCATATTCTGCCACCAATTACTTTGCATATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTCTGATAGGATCTGCAGCTGGTGCTATTTCAAGTAGTGCCACCTTTCCTCTTGAAGTGGCCCGCAAGCACATGCAAGTGGGAGCCCTGAGTGGAAGGCAAATATACAAAAATGTGATTCATGCCCTTGCAACCATTCTTGAGCAAGAAGGGATTCAAGGATTGTACAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTGGTAGAGGACCAAGATGAGGAGTAG 1212 0.4579 MGGRGIKLFDEERNGLFSISNFGSQWGGGIHDPAAIAMFASVSQMGMGFGVQEPNPPSGDSQHNGGMNIRIPCTELYVRYVQSEGKVKITGVSEEEEGVAGVKGKKKGVFKGLRIKVKNPSLRRLISGAFAGAVSRTTVAPLETIRTHLMVGSSGNSTGEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSAKQGEQPKLPIPPSLIAGACAGVTSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQIYKNVIHALATILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDQDEE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0532 403 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 32 401 - -
Pvu1g0532 403 Gene3D Mitochondrial carrier domain 115 401 IPR023395 -
Pvu1g0532 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 202 IPR018108 -
Pvu1g0532 403 Pfam Mitochondrial carrier protein 213 300 IPR018108 -
Pvu1g0532 403 Pfam Mitochondrial carrier protein 307 398 IPR018108 -
Pvu1g0532 403 Pfam Mitochondrial carrier protein 120 204 IPR018108 -
Pvu1g0532 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 297 IPR018108 -
Pvu1g0532 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 307 395 IPR018108 -
Pvu1g0532 403 SUPERFAMILY Mitochondrial carrier 120 391 IPR023395 -
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 124 137 IPR002067 GO:0055085
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 137 151 IPR002067 GO:0055085
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 177 197 IPR002067 GO:0055085
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 228 246 IPR002067 GO:0055085
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 270 288 IPR002067 GO:0055085
Pvu1g0532 403 PRINTS Mitochondrial carrier protein signature 316 338 IPR002067 GO:0055085
Pvu1g0532 403 PANTHER SOLUTE CARRIER FAMILY 25 32 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0532 Pvu-Chr1 5899210 5902472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0532 304 403 Organic Solute Cotransporters AT4G32400 28.846 1.31e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0532 K14684 - gmx:100816041 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0532 1 5899210 5902472 Pvu1g0532 1 5899210 5902472 ECH
Pvu1g0532 1 5899210 5902472 Pvu9g0965 9 14493886 14497655 PCT