Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0523 ATGGATCCAATTAACCTTTTACCTGCTGATGGGGTTGAAGTGGTCCACCAAAATGGGGTCCACGATGAACCTTCAAATTCTGGGGAGGATGGTGGTGCTTCATATGATTTAGACCCCAGTGTCACTGAAACTGCAGAAACTGTAGCTTCAAATGGAAATTTTGATAATGTCCATCAGTCAGATAGTGCTGCAATTGATAACTTATTTGTGGCACAAATCAAAGAATCAAATGACATTATTGATGGCAATAGCATGATCATTACTAAGGAAGAGGATATGAAAATATCAGATCAAACAAAACAGTCAAGGGCACCAAAGGGTTTTGTCAAGAATAAGAATGCAAAGGCTCCAAGTTCCAGTGGTGTTCATGCAGGTTTGGTGAATAAGAGCAAAATTAGAAAAGATAAAGAAATATCCTCATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCCCAAAACAGTCTATTAAAAGCAGCAGATCATTCAATGATCGGCAGACTGAATTGTCCAATCCCAAGCACCCTTTGAAGTCTGATGAAGCATCTTCTGAAGTATCAATGGAGAAGACAAAAACAAAATCATTGAGAAAAGGACCTGTTAAAGATCAAGAAATAGATTCTTCCTTAAGCACCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGCGAACGAGCCGAGAGAAGAAAAGAGTTCTATGATAAGCTTGAGGAAAGGATTCAGGCAAAGGAAGAGGAGAAGAATAACATGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCAAGCTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGCCAAAATCTCCCAAGTTTGGTCGTAAGAAGACTTCAGCTAATTCAGAGTCAGATGGAAACAATAGCAGTGGTTCAAGATTAGCTCGTTTAAGTCTGGATGAGAAAGTGTCAGAGAGTAACCCCAGTAAGGGACCTAATCCTGTCCTTCAAAAGAAGCCGCATCGAAGATCCCTTCCTTCTCGTCTGGCCTCCGAAAGGAACAGTGCATCAAAATCAACAACTGCACATACTTCATCCAAGGCTATCAAAGATGAAAAGTCTTCCTTATCTCATGCTGCTAAAAAGGATACTATCATATCCAATGCCACAGGAGAAGTGAAAACCGACACGGTTGCAGCAAATGAGGAGAAAAGTATCTTGTCCAGTCAAACAATTGAGGTTGTGCTTCTGAATGTGGCTGCTTCAGATAATAAGTCGAGTGAAGACTCTCATGTGAATGTTGATATAGCAGTTGAAGAGAAACCTCTGCCCCCCTTGGCACAAGAACCTGTTGCTGCACAGCAATGA 1434 0.41 MDPINLLPADGVEVVHQNGVHDEPSNSGEDGGASYDLDPSVTETAETVASNGNFDNVHQSDSAAIDNLFVAQIKESNDIIDGNSMIITKEEDMKISDQTKQSRAPKGFVKNKNAKAPSSSGVHAGLVNKSKIRKDKEISSSVSNGTLALDSRPKQSIKSSRSFNDRQTELSNPKHPLKSDEASSEVSMEKTKTKSLRKGPVKDQEIDSSLSTNNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYDKLEERIQAKEEEKNNMQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNNSSGSRLARLSLDEKVSESNPSKGPNPVLQKKPHRRSLPSRLASERNSASKSTTAHTSSKAIKDEKSSLSHAAKKDTIISNATGEVKTDTVAANEEKSILSSQTIEVVLLNVAASDNKSSEDSHVNVDIAVEEKPLPPLAQEPVAAQQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0523 477 MobiDBLite consensus disorder prediction 443 477 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 387 401 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 371 386 - -
Pvu1g0523 477 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 464 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 171 204 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 254 280 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 402 426 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 317 337 - -
Pvu1g0523 477 PANTHER PROTEIN WVD2-LIKE 4 1 464 IPR044833 GO:0008017
Pvu1g0523 477 MobiDBLite consensus disorder prediction 139 170 - -
Pvu1g0523 477 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Pvu1g0523 477 Coils Coil 238 275 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 17 40 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 205 220 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 91 231 - -
Pvu1g0523 477 MobiDBLite consensus disorder prediction 254 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0523 Pvu-Chr1 5722368 5727887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0523 - - gmx:100786958 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0523 1 5722368 5727887 Pvu1g0523 1 5722368 5727887 ECH
Pvu1g0523 1 5722368 5727887 Pvu9g0955 9 14357797 14364452 PCT