Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0517 ATGGCTTTCTCCGTTTCACTTCGCCCTACCACTTCTCCATCTCACTCACAGCTGTTTTGCTCTGTTAAGTTCAGTAGTAGTAGGCGTCGTAGTAGCCGATTAGGTTTCGAGGCGGACTGCGGGAGAGTATGTCGTCGTTTACGGAACAGTGTTAGTGTTAGGTCGGTGTTGAACGACAATAGGCCTAGCGTGAACGATTATGGAGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGTTGTTCGATCCGACGCAGAGCCGGTTCAGCGGAGAGGAACCGGATCTTCGGATTCTGGAATCGGATCTCGAGGCGGTTCTTTCGGCGCTGAAGAAGAAGGAGGATCACTTGATGGAAGCGGAGAAGACGGTGTTGTTGGAGAATAGTAAGTTGAAGCACACGAAGGAGGAGTTGGAGCGGCAAGAGAGTGAGATTGAGGCTGCTAAGGATAGGTATGAGAAGCTCCAGGAGGAGATGAAAGAGACTACTGCTGAATTGGTTGCTCAGGCGAGTCAGGTTGAGGAGCTGAAGCTTAAGGTTAGGGATCGGGATCATGAGATTGATGCGGTCCAGTATGGTTTGAGGTTGAAGGAGGAGGAAGTGGAGAAAATGAGGGTTGAATTGGAGGTGAAGAGTCAGGAGGTTGCGGTTCTTGAATCTGGGCTTAGAGAGAAAGGGAAGCTTCTGGATGAAGCCAACGAGATTATGAAGAAACAGAGGGCTGAGCTTGAGGAGCTGAAGAAGGCGGTTGGAGATAAGGAGGAGGAGATTGAGGTCTTTCTGGTTCAGAGGGAGGTTGAGAGGGAGAAGCTGAAGGTTGCCGAGGCAAATTTAGAGAAGCAGGCAATGGATTGGTTGTTGGCGCAGGAGGAGCTTAAGAGTCTGGGAGAGGATGCTGCGAGGCATGCTAAGGAGAGTAATGAGACTTTGGATGATTTCAGAAGGGTGAAGAAGCTTCTGAATGATGTGAGGTCTGAATTGGTTAATTCTCAACAAGCATTGGCGTCTTCTAGAAGCAAAATGGAAGAGCAAGAGCGGTTGTTGGAACAGCAGCTGTCTGAGCTTTCGGAGCAGAGGGCAAGTGTTATGTCATACATGGAAAATTTAAAGGATGCACAGACAGAAGTGGAGAGTGAAAGAACAAAACTCAGGATTGTCGAGGCTAGGAACAAAGAGCTTGAACGAGATCTGAAGATGGAAATGGAGCTTATCAGTGACTTAGAGGAGGAGTTGAAGAAAGAGAGAACTTCTTTAGAACAGGCAGTCACGGAAATGGATTTGCTTCAGCGGGAACTGGATAAACGAAGTGCTGAATTTAGAGAAACAAGTGCCGTTCTTCAGGTCAAAGAATCAGAGCTCGTTGATGCTAAACTAGAAATCCAGCGTTTGAAATCTGAGAAAGCTTCCCTGCAGGGTATCTTGGAGGAGAAAGACGTGGAGCTTTCCAGTGCTAGAAAGATGATGGTGGAAGTTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGCAAAGAAACGCAGCTTATTGAAGCAACCAATATGCTAAGGGAGAAAGATGAGCATGTGAAGATAATCCAGAGCAAGTTGGATGATACAAACCAGAAGGCTGTCGAAGCTGGAACGGTGGTTGAAAGAATTTTAGATCTTACAAACAAACTGGTTGCTTCCATTAAGGATGAAGACATGAACCCATCGAGACCACTGCTAGATGGAATGGGTAATCAACTACTTGAGCAACTGTTGGAGGAACCTGCTAATGAAATGAGATGGCAACAAAAAAGACTTGAGAATGAACTTGAGTTGGCCAAGGAAAACTTAAAAGAAAAGGAGATGGAGGTTCTTGCTGCACAGAGAGCTCTAACAATAAAAGACGAGGAGCTGAAAATGACTCTTACAAGATTGGATGCAAAAGAGGAAGAGTTGAAAAAAGTAAGGGAAGAGGTGACAGAAGATTCTAAGGATCTTAAAAGGCTGTATGCTTTGGCACAGGAGAAAATTGGCGAGGCAAGCTTAGGAGATTTGGCAATTGAGAAACTTCAGCTTGAGACAGCTCAGCTTGAAGTTGAAGCTGCCACCAATGCACTGCAAAAACTTGCCGAAATGAGTCGTGAACTTCTGAATAAGACTATGCTGAGTGCTGAAGCTGATAACTATATCAGTCTTGTGCCAATTAATGAAAAAAATCCGAATTCGATGAGCGATGCCATTAAATCTGACTATTTCTCTGAGGTAAAAGCAGGAGTGGCTCGACTCTCAGCTTTGTCTGAGCAGCTGGTGATGGAGGCAGGCATTGCTTCTGCAAACTAA 2307 0.4577 MAFSVSLRPTTSPSHSQLFCSVKFSSSRRRSSRLGFEADCGRVCRRLRNSVSVRSVLNDNRPSVNDYGAAESARVLFERLFDPTQSRFSGEEPDLRILESDLEAVLSALKKKEDHLMEAEKTVLLENSKLKHTKEELERQESEIEAAKDRYEKLQEEMKETTAELVAQASQVEELKLKVRDRDHEIDAVQYGLRLKEEEVEKMRVELEVKSQEVAVLESGLREKGKLLDEANEIMKKQRAELEELKKAVGDKEEEIEVFLVQREVEREKLKVAEANLEKQAMDWLLAQEELKSLGEDAARHAKESNETLDDFRRVKKLLNDVRSELVNSQQALASSRSKMEEQERLLEQQLSELSEQRASVMSYMENLKDAQTEVESERTKLRIVEARNKELERDLKMEMELISDLEEELKKERTSLEQAVTEMDLLQRELDKRSAEFRETSAVLQVKESELVDAKLEIQRLKSEKASLQGILEEKDVELSSARKMMVEVNQEISDLKMLMNSKETQLIEATNMLREKDEHVKIIQSKLDDTNQKAVEAGTVVERILDLTNKLVASIKDEDMNPSRPLLDGMGNQLLEQLLEEPANEMRWQQKRLENELELAKENLKEKEMEVLAAQRALTIKDEELKMTLTRLDAKEEELKKVREEVTEDSKDLKRLYALAQEKIGEASLGDLAIEKLQLETAQLEVEAATNALQKLAEMSRELLNKTMLSAEADNYISLVPINEKNPNSMSDAIKSDYFSEVKAGVARLSALSEQLVMEAGIASAN* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0517 768 Coils Coil 193 215 - -
Pvu1g0517 768 Coils Coil 627 665 - -
Pvu1g0517 768 Coils Coil 445 507 - -
Pvu1g0517 768 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 48 764 - -
Pvu1g0517 768 Coils Coil 221 262 - -
Pvu1g0517 768 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 48 764 - -
Pvu1g0517 768 Coils Coil 674 708 - -
Pvu1g0517 768 Coils Coil 326 437 - -
Pvu1g0517 768 Coils Coil 585 619 - -
Pvu1g0517 768 Coils Coil 102 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0517 - - var:108336972 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0517 1 5633303 5636382 Pvu1g0517 1 5633303 5636382 ECH