Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0513 ATGCAGGCCATAGGAAAATCAAGAGCCTCTCCACCATCACAACAACAACAGAGCAATATCAACAATAACAACATCAATTCAATCATCACAACAATGACCAACTACAAAACCTACTGCAAAAAACTCATCCCGTTACTTTCCAACTCACCTGAACAGTACACAGCCATCGAAATGACCGGTACCGATCGTCCCGGATTATTTTCCGAGATTTCAGCAGCGTTGGTGGATCTCCATTGCAACATAGTTGAAGTTCACGCATGGAGTCACAACGCACGACTCGCATGCGTGGCTTACATATCGGATCAATCCACCGATTCCGCCATTGAGGACCCTTCTCGTCTAAGCTCGATAGAGGATCACTTGACAACTGTGCTGCGTGCCACCACTAATCCTATTGGTGATGGCACGCTCAGCTACCCAGATGTCAAGACCTCTGAGCTTCTAGGAGAAGGGAACATGACAAGCGTGGAACGAAGATTGCACCAGCTTATGCTTTCGGTGAGGGACTTTGAGGCTCCCTCTTCCCCCAAAGAGATGAAGGGAAGAAAAAGAATGGTGACAATCGAAAGTTGTGAACAAAAGGGGTATTCAATTGTGAGCATTGAGTGTAAGGATCGTCCCAGACTCATGTTTGATACCGTTTGCACGTTAACAGACATGGAATACGTTATTTTCCATGCTTCCATCACTTCCCATGGAAGCTATGCATTTCAGGAATATTTTATCAGGCACGTAGATGGATATGCTTTAGATACTGCATGTGAGAAGGAACGAGTAATAAAATGCTTAGAGGCAGCCATAGAACGTCGGGTTTGTGAGGGTGTTAGGTTAGAGTTATGTGCAGAGAACAGAGTAGGGTTACTATCGGACATAACACGAGTCCTGCGAGAGAATGGATTGGTGGTTGTTCGAGCAGACGTTGAAACGCATGGAGAGAAAGCCGTGAACGCTTTCTATGTCAAGGACGTATCAGGGAACGAGGTTGATGTAGAATACTTCACCAACTCAGTCAAGAGGGAAATGGGTCCAATCCTCACACTCCATGTCAAGAATGACACCACCAGAAGAAAAACAACCTCCCCTAAACGTTCACCTTCTCTCTCCTTCGGAGGCATGCTAAGATCTCGGATTGAACGTCTTTCTCATGGCTTCATTATATGA 1161 0.4565 MQAIGKSRASPPSQQQQSNINNNNINSIITTMTNYKTYCKKLIPLLSNSPEQYTAIEMTGTDRPGLFSEISAALVDLHCNIVEVHAWSHNARLACVAYISDQSTDSAIEDPSRLSSIEDHLTTVLRATTNPIGDGTLSYPDVKTSELLGEGNMTSVERRLHQLMLSVRDFEAPSSPKEMKGRKRMVTIESCEQKGYSIVSIECKDRPRLMFDTVCTLTDMEYVIFHASITSHGSYAFQEYFIRHVDGYALDTACEKERVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLVVVRADVETHGEKAVNAFYVKDVSGNEVDVEYFTNSVKREMGPILTLHVKNDTTRRKTTSPKRSPSLSFGGMLRSRIERLSHGFII* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0513 386 ProSiteProfiles ACT domain profile. 276 352 IPR002912 -
Pvu1g0513 386 ProSiteProfiles ACT domain profile. 55 135 IPR002912 -
Pvu1g0513 386 CDD ACT_ACR_2 54 127 - -
Pvu1g0513 386 SUPERFAMILY ACT-like 50 125 IPR045865 -
Pvu1g0513 386 Pfam ACT domain 56 105 - -
Pvu1g0513 386 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR2 23 385 - -
Pvu1g0513 386 Gene3D - 275 341 - -
Pvu1g0513 386 Gene3D - 49 130 - -
Pvu1g0513 386 CDD ACT_ACR_3 196 270 - -
Pvu1g0513 386 SUPERFAMILY ACT-like 273 334 IPR045865 -
Pvu1g0513 386 Pfam ACT domain 276 324 IPR002912 -
Pvu1g0513 386 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g0513 386 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 23 385 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0513 Pvu-Chr1 5565130 5567338 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0513 - - pvu:PHAVU_001G050200g 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0513 1 5565130 5567338 Pvu1g0513 1 5565130 5567338 ECH