Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0512 ATGGACATTCCACGTACATATCCCTTCCCTCCAATTCTCACGCTGATTCTACTTTCGTTCGTCGTCGTCGTGGTGCTGCGTCAAGTTCAGTTACTCCAATTCACGACAATCGCTGGTTCAAAACATGGACATTCCGTTCCTCTGGATCGTCTGCGAATGAAGTTATCTGGCCAGAATCAACTTCACGCCATCGCAAATTCCGGCGAACTTCGCCGGAACAAATTCAGTCACCGAACTGCTACCAGGAAGGTAGGAAAACTAGAACAAACACTCGCGGCGGCGAGAGCTTCGATGCGAAATGCTGCGTCAGAATCAGAAGGTGAGAGAAGCAATCTCACTGTGGCAACCACCGTGCATGACGGCGGCGACCGCAACTATGTACCAGCTGGAGCTATCTATCGTAACGCTCGCTTGTTTCATCGGAGCTACCTGGAGATGGAGAAAATATTCAAAGTGTACGTATACCCAGATGGTGAGCTACCAATCGCTCACGATGGCCCGTGCAAGGACATATACTCAATTGAAGGAAGGTTTCTCCATGAGATGGAACATGGCGCAGGGAGGTTTAGGACCAACGATCCCAATGCCGCTCACGTTTACTTCTTGCCATTCAGTGTGACTTGGATGGTGAAGTACCTCTACACTCCACTCTCATACAATGTCACTCCTTTAAAGCATTTTGTCTCTGACTATGTGAAAGTGATTTCCACGAGGCACCCCTTCTGGAATAGAACTCATGGTGCCGACCACTTTATGCTTGCCTGTCATGATTGGGCTCCTCATGCATCACAGGGAAATCACTTCCTCTACAACACCTCTATCCGTGTCATGTGCAATGCCAACACTTCAGAGGGCTTCAACCCTCGTAAGGACGTGTCCCTTCCAGAAATCCACCTTTACGGAGGCGAAGTCTCCCCCAAACTTCTCTCACCCCAATCCAATAACATTACACGTCGCTACCTCGCCTTCTTTTCCGGCGGTCTGCACGGCCCAATCCGCCCCATCCTCCTCCACCACTGGAAGAACCAAGACGGGGACATTCGCGTCTTCGAGTACCTCCCCAAAGACCTAGACTACTACTCCTTCATGCTGAACTCCAAGTTCTGTCTTTGTCCCAGTGGCCACGAAGTGGCTAGTCCCAGAATCGTGGAAGCAATTTATGCCGAATGCGTTCCCGTGATCCTTTCGAAGTATTACGTGTTGCCCTTCAGTGATGTGCTGCAATGGGAAGCGTTTTCGGTGCAGGTTGATGTTTCAGATATTCCGAGGTTGAAAGACATTCTTAGTGCGATTTCAGAGGATGAATATCGGAAGCTGAAGGAGGGAGTGAAGGCTGTGAGGAAGCATTTTACACTGAATCGGCCTTCCAAAAGATTTGATGTATTTCACATGATCTTGCACTCTATATGGTTAAGGAGACTAAACATAGAACTCAGATAG 1440 0.4896 MDIPRTYPFPPILTLILLSFVVVVVLRQVQLLQFTTIAGSKHGHSVPLDRLRMKLSGQNQLHAIANSGELRRNKFSHRTATRKVGKLEQTLAAARASMRNAASESEGERSNLTVATTVHDGGDRNYVPAGAIYRNARLFHRSYLEMEKIFKVYVYPDGELPIAHDGPCKDIYSIEGRFLHEMEHGAGRFRTNDPNAAHVYFLPFSVTWMVKYLYTPLSYNVTPLKHFVSDYVKVISTRHPFWNRTHGADHFMLACHDWAPHASQGNHFLYNTSIRVMCNANTSEGFNPRKDVSLPEIHLYGGEVSPKLLSPQSNNITRRYLAFFSGGLHGPIRPILLHHWKNQDGDIRVFEYLPKDLDYYSFMLNSKFCLCPSGHEVASPRIVEAIYAECVPVILSKYYVLPFSDVLQWEAFSVQVDVSDIPRLKDILSAISEDEYRKLKEGVKAVRKHFTLNRPSKRFDVFHMILHSIWLRRLNIELR* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0512 479 PANTHER EXOSTOSIN FAMILY PROTEIN 64 477 - -
Pvu1g0512 479 Coils Coil 84 104 - -
Pvu1g0512 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 64 477 IPR004263 GO:0006486|GO:0016757
Pvu1g0512 479 Pfam Exostosin family 148 430 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0512 Pvu-Chr1 5552206 5560787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0512 - - gmx:100794890 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0512 1 5552206 5560787 Pvu1g0512 1 5552206 5560787 ECH
Pvu1g0512 1 5552206 5560787 Pvu9g0942 9 14195190 14198929 PCT