Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0504 ATGTGGAGAGAGAGAGCATTCATGGCGGTACTGCTACTTCTAGTCCACAAAATCCATGGTGGCTGCCCCCCTTCTTCCTGTGGAAAAATCAGCAACATCAGTTATCCATTTCGATTAAAAGGCGACCCAGAAAAGTGTGGTGAGGAAAGGTATGAACTTGGTTGTGAGAATAACGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGCAGGCAATAAACTACAAGAAGAACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTCAAAAATACTTTTACCAGTCGGATCCATACCAAGCCGGTCTAAGAGCCTCTGTAAATTGGGAATCTCTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAACCATTCGGTGAGAGAGAAAGAGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATTCATATGCAATTGGTGGAGACCTAAAAGCAGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTACAATAACCATTCCTACACTTCCATGCACACCGCACTCGCCTATGGATTTGAGATTTCATGGATGCAACTCGCCTGTCAGAAACATTGTCCAGTTTTCTATAAAGATTGCTACTTCGACTCTTCTAAACAGAAGCTTAAATGCCGGCAAGCCCTTTTGAATAATGGCACTGTATCTATCCTCCAGCTCTATATTTCTCTCTTCAATATAGCTTTTTTTTTATCAGCAATGAATAAATAA 831 0.4296 MWRERAFMAVLLLLVHKIHGGCPPSSCGKISNISYPFRLKGDPEKCGEERYELGCENNVTVLYLYSAKYHVQAINYKKNTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTQKYFYQSDPYQAGLRASVNWESLSFSHIVFVNCNHSVREKEKYVESGEWVKWEGKGYSYAIGGDLKAEDLEVGCEVKLVAPTSLSTYNNHSYTSMHTALAYGFEISWMQLACQKHCPVFYKDCYFDSSKQKLKCRQALLNNGTVSILQLYISLFNIAFFLSAMNK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0504 276 Pfam Wall-associated receptor kinase galacturonan-binding 22 85 IPR025287 GO:0030247
Pvu1g0504 276 PANTHER OS01G0113900 PROTEIN 11 228 - -
Pvu1g0504 276 PANTHER OS01G0690200 PROTEIN 11 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0504 Pvu-Chr1 5446675 5448534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0504 12 245 Receptor kinase-like Gene Family AT5G38260 22.400 9.39e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0504 - - pvu:PHAVU_001G049300g 570.466