LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g0501	ATGATGTGGCGAAACAGAGCATTCATGGTGATATTGCTACTTCTAGTCCATAAAATCCATGGTGGCTGCCCCCCTTCTTCCTGTGGTAAAATCACCAACATCAATCACCCTTTTCGATTAAAAGGCGACCCAGAAAAGTGTGGTGAGAAAAGGTATGAGCTTGGTTGTGAGAATAATGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGCAGTCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACGCTTACTACACGGATCCATACCAAGCTGGTCTAAGAGCCTCTGTAAATTGGGAATCTCTGAGTTTCTCGCATATAGTGTTGGTGAATTGTAACGATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATTCATATGCAATTGGTGGAGACCTAAAAGCAGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACCATTCCTACTCTTCCATGCACACCGCACTCGCCTATGGATTCGAGATTTCATGGATAAAACTACCCTGTCAGAAACATTGTTCACTTTCCTATAGAGATTGCTATTTCGACTCTTCTAACCAGAAGCTTAATTGCGGGTATG	733	0.4434	MMWRNRAFMVILLLLVHKIHGGCPPSSCGKITNINHPFRLKGDPEKCGEKRYELGCENNVTVLYLYSAKYHVQSINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYAYYTDPYQAGLRASVNWESLSFSHIVLVNCNDSVGEKGKYVESGEWVKWEGKGYSYAIGGDLKAEDLEVGCEVKLVAPTSLSTFDNHSYSSMHTALAYGFEISWIKLPCQKHCSLSYRDCYFDSSNQKLNCGY	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g0501	244	Pfam	Wall-associated receptor kinase galacturonan-binding	23	86	IPR025287	GO:0030247
	Pvu1g0501	244	PANTHER	OS01G0113900 PROTEIN	10	229	-	-
	Pvu1g0501	244	PANTHER	OS01G0690200 PROTEIN	10	229	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g0501	Pvu-Chr1	5414570	5415408	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu1g0501	13	242	Receptor kinase-like Gene Family	AT5G38260	23.695	4.67e-09	54.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g0501	-		-	pvu:PHAVU_001G0486000	496.893