Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0490 ATGAGAAACAGTTTGGACATGATGTGGAGAGAGAGAGCAGTGTTGGTGGTACTGCTACTTCTACTCCACCATATTTCTGCTACCAAGGACGAGCAACAACTCTTTTGTCCCCTTTCTTCCTGTGGAAAAATCAGCAACATTAGTTATCCATTTCGATTAAAAGGCGACCCAGAAAAGTGTGGTGAGGAAAGGTATGAACTTGGTTGTGAGAATAACGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGCAGTCAATAAACTACAATAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGTTCCAATTTCTCTGACACTTACACTTACACTTCCTTTTACGACTCGGATCCATACCAAGCCGGTCTAAGATCCTATGAAAATTGGGAATTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAACCATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCAGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACCATTCCTACTCTTCCATGCACACCGCACTCAACTATGGATTCGAGATTTCATGGATAGAACTCGCCTGTCAGAACCTTTGTCCACATCGATTCTGCTATTTCGCCTCTTCTAACCAGAAGCTTAAATGCGAGGGTTTTCATACAATACTGGAATTGCTAGAGACAATAATAGAACCAGGTAAGATTTTATCATCTTAA 837 0.4301 MRNSLDMMWRERAVLVVLLLLLHHISATKDEQQLFCPLSSCGKISNISYPFRLKGDPEKCGEERYELGCENNVTVLYLYSAKYHVQSINYNNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTYTSFYDSDPYQAGLRSYENWELSFSHIVFVNCNHSVGEKGKYVESGEWVKWEGKGYAYAIGGDLKAEDLEVGCEVKLVAPTSLSTFDNHSYSSMHTALNYGFEISWIELACQNLCPHRFCYFASSNQKLKCEGFHTILELLETIIEPGKILSS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0490 278 Pfam Wall-associated receptor kinase galacturonan-binding 36 99 IPR025287 GO:0030247
Pvu1g0490 278 PANTHER OS01G0690200 PROTEIN 10 241 - -
Pvu1g0490 278 PANTHER OS01G0113900 PROTEIN 10 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0490 Pvu-Chr1 5242170 5243423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0490 14 256 Receptor kinase-like Gene Family AT5G38260 23.077 5.66e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0490 - - pvu:PHAVU_001G048700g 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0490 1 5242170 5243423 Pvu1g0490 1 5242170 5243423 ECH