Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0482 ATGGAGCCGGAAGTGAGTATCGAAGGATCGGCGATGATTCAGGTGGCGGTGGTTCCAATCGGAACGGTGCCGTCGAACCTGCTGCGGGACTACTACTCCATGCTGATACCGCTGCACACGATCCCGCTCTCTGCCATCAGCTCCTTCTACACCGAGCACCAGAAGTCCCCCTTCGCCGTCCAGCCCTGGGACTCCGGCTCCCTCCGCTTCAAGTTCGTCCTCGGCGGCGCGCCGCCCAGCCCCTGGGAGGACTTTCAGTCGAACCGCAAAACCCTCGCCGTCGTCGGTGTCGTCCACTGTCCTTCCTCCCCCGATCTCGACACCGCCGTCGACGTTTTTTCCAATGCCTGCAAGTCCTTCCCTTCTTCCCTCGTCGATCGCTGTTTCGCCTTCTGCCCAAACGATTCGCAGCTTGAGGATGGAAGTAAGAAAGGGGGAAATTTGAGGTTGTTTCCTCCTGCAGATCGTCCTACATTGGAGTTCCACTTGAACACAATGATGCAAGAGATTGCTGCGTCACTGCTTATGGAGTTTGAGAAATGGGTGCTTCAGGCAGAATCTTCCGGAACCATTCTCAAGACGCCTTTAGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGAAGGCTTGGGCGTGCTCAGAAGACCATTGGTGATTACTGTTTGCTAGCAGGCTCCCCTGTCGATGCCAATGCTCATTATTCTACTGCATTGGAACTTTCCAGGTTAACTGGTGATTACTTCTGGTATGCTGGAGCAATGGAGGGTAGTGTCTGTGCCTTGTTGATTGACCGTATGGGCCAAAAAGATTCAGCACTGGAAGAAGAAGTTAGATATCGTTATAATATTGTGATCATGAATTACAAGAAGTCACAAGATAATGTTCAGCGAGTTTCTCCCCTAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTTCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTAGAGTTGTTGACCACAGCTGCAGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTCATATTATATATTGAAATAGCTCGTCTGTATGGAAGTCTTGGATACCATAGAAAAGCTGCATTTTTCTCAAGGCAGGTTGCACAGTTATATCTGCAGCAAGAAAATAGATTGGCTGCCATTAGTGCTATGCAAGTTTTGGCAATGACCACCAAAGCTTATCATGTTCAAAGTAGATCATCTCTCTCTGATCATTCTTTGCACCGTAATGGAATTGTATCAAATAATGCTGATAGTGGGAAAACAAACCACCAATCAGCAGTCTCACTATTTGAGTCTCAATGGAGTACCCTCCAGATGGTTGTATTAAGAGAAATTCTACTTTCTGCTGTCCGTGCTGGTGATCCTCTTACTGCATGGAGTGCAGCAGCACGACTCCTTAGATCCTACTATCCTCTAATAACACCTGCTGGGCAAAATGGCCTTGCTAATGCACTTTCAAATTCAGCTGACAGGCTGCCACTAGGGACTCGTTGTGCTGATCCTGCTTTACCCTTTGTGAGGCTGCATTCCTTTCCTCTCCACCCAACACAAATTGACATAATAAAGCGCAGTTCTGCTAGAGAAGACTGGTGGGCCGGTGCTGCTCCTTCTGGCCCTTTCATTTATACACCATTCAGTAAAGGAGAGTCTAATAATATCAAGAAGCATGAGCTTATTTGGATTGTTGGAGAACCTGTTGAGGTCTTGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGATAGCATCTATCTATCCGTGCATTCTGGAAATTTTGATGCTTTCCCCGTAAGTGTAAGCCTTCTACCAAATTCTTCAAAAGTGATCACCTTATCTGGCATTCCAACATCAGTGGGACCAGTTTCTATTCCTGGGTGTATTGTTCACTGTTTTGGTGTTATTACTGAACATCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCTCACAAGGGCTGGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCTAAGTTGAAAAATGTGTCTGTTCCCAATATATCTGTTGTACCACCACTTCCATTATTGGTATCTCATGTTGTTGGAGGTGATGGAGCCATCATATTATATGAAGGTGAAATTCGGGATGTGTGGATTCGCCTGGCTAATGCAGGTACTGTTCCAATTGAACAGGCCCATATTTCATTGTCCGGGAAAAATCAAGATTCTGTAATTTCATATTCTTCTGAAACTTTGAAATCTTGCCTCCCTCTGAGACCTGGAGCAGAAGTTACATTCCCTGTGACCTTGAGGGCCTGGCAGGTTGGCTTGGTGGATGCAGATGCTGGTGCTGGGAAAACTGTCTCAGGGAACTATATGAGGCATTCCAAAGATGGAATCAGCCCATCGCTGTTGTTCCACTACGCTGGTCCAATGAAAACCTCTGAAGATACTCCAACAAATGGATCTACTGTGCCCCCTGGCAGACGGCTTGTTGTTCCACTGCAGATTTGTGTTTTGCAGGGCTTGTCCTTTGTGAAGGCTCAGCTTCTTTCAATGGAGTTTCCTGCTCATGTTGGTGAAAGTCTTCCAAAGTTGGATGTAAATAATAAGTCTACTGGTGAACATGTTGACTCAGAGACAAAAATGGACAGATTGGTTAAAATAGATCCTTTCAGAGGAAGTTGGGGGCTGCGATTCCTTGAACTTGAGTTATCTAATCCAACTGACGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAAATCAAGCAATGAGAACAACCATTTTACTGATCAGGGTGCTACAGAATATGTCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCAAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCTGTCCTTGACGATTCCTTTTTTATAAAGGATACCCAGTTAGATGGGAATGGTGGAGGAAGAAATGCATCCTTCTCAGAGAAGAACACCAAAGCTGAACTAAATGCTTGCATCAAGAACCTCATATCTAGGATTAAGGTTCGATGGCATTCAGGACGAAATAGCTCTGGAGAGTTAAATATCAAAGAAGCTATCCAGGCTGCTCTCCAAACATCAGTCATGGATGTTTTACTTCCAGATCCATTGACGTTTGGCTTCAGGCTTGTTAGAGATGATTCGGAATCAAAAAAAACTGAACCTGATAAAGAATCTGAATCTGCTGTTTCCAAAGGTTCAGTGATTGCACATGAAATGACACCAATGGAAGTTCTGGTTCGTAATAATACTAAAGATATGCTCAAAATGAGTCTTAATATTACATGCAGAGATGTAGCCGGGGAAAATTGTGTAGATGGTACCAAAGCGACTGTTCTATGGACAGGTGTTCTGAGTGACATTGCTATGGAAATTCCACCACTTCAACAAATTAAACACTCGTTCTGCTTACATTTTCTTGTCCCTGGAGAGTATACACTACTTGCTGCAGCAGTGATTGATGATGCAAATGACATTCTTCGTGCTCGTGCGAAGACCACCTCGGCTGCTGAACCAATTTTCTGTCGTGGACCACCGTATCACGTTCGTGTCCTTGGAACTGCATGA 3591 0.4495 MEPEVSIEGSAMIQVAVVPIGTVPSNLLRDYYSMLIPLHTIPLSAISSFYTEHQKSPFAVQPWDSGSLRFKFVLGGAPPSPWEDFQSNRKTLAVVGVVHCPSSPDLDTAVDVFSNACKSFPSSLVDRCFAFCPNDSQLEDGSKKGGNLRLFPPADRPTLEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDYFWYAGAMEGSVCALLIDRMGQKDSALEEEVRYRYNIVIMNYKKSQDNVQRVSPLTFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYHRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSLSDHSLHRNGIVSNNADSGKTNHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSADRLPLGTRCADPALPFVRLHSFPLHPTQIDIIKRSSAREDWWAGAAPSGPFIYTPFSKGESNNIKKHELIWIVGEPVEVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVSLLPNSSKVITLSGIPTSVGPVSIPGCIVHCFGVITEHLFKEVDNLLLGASQGLVLSDPFRCCGSPKLKNVSVPNISVVPPLPLLVSHVVGGDGAIILYEGEIRDVWIRLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSCLPLRPGAEVTFPVTLRAWQVGLVDADAGAGKTVSGNYMRHSKDGISPSLLFHYAGPMKTSEDTPTNGSTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGESLPKLDVNNKSTGEHVDSETKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLEKSSNENNHFTDQGATEYVYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFIKDTQLDGNGGGRNASFSEKNTKAELNACIKNLISRIKVRWHSGRNSSGELNIKEAIQAALQTSVMDVLLPDPLTFGFRLVRDDSESKKTEPDKESESAVSKGSVIAHEMTPMEVLVRNNTKDMLKMSLNITCRDVAGENCVDGTKATVLWTGVLSDIAMEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARAKTTSAAEPIFCRGPPYHVRVLGTA* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0482 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 268 IPR013935 -
Pvu1g0482 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 196 IPR013935 -
Pvu1g0482 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Pvu1g0482 1196 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1194 IPR013935 -
Pvu1g0482 1196 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1194 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0482 K20306 - gmx:100784850 2213.73