Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0479 GTGCCATGGTCTGAGTACAGATATTATGATCCCAAGACAGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCTGAAGGATCTTTTGTGCTTCTACATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCTGAGCAATGGGAAAAAATAGCTGATTTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGCTTTGCCAGTGGAAGCCTTGACGAAGATGCAGCTTCTGTGAGGCTTTTTGTTGCACGTGGTATGGAGGTTCTTGTAGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCATCATCCCCAGAATCTGCAGCAAGGGTAAAGAGCCAGCTGAAAAGGCTCGCCCGACCAATGTACTCAAATCCACCTGTACATGGGGCTAGAATTGTTGCCGATGTTGTTGGAAACCCAGTTCTCTTTAATGAATGGAGAGCAGAAATGGAAATGATGGCTGGAAGGATCAAGAATGTTAGACAACAGCTATACAATAGTATTACTTCAAAAGACAACAGTGGAAAAGATTGGTCATTTATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGGAACAGACTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGACGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCTAAATGTGAATACCTTGCAGATGCTATTATAGACTCGTATCATAATGTCAGCTGA 786 0.4186 VPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFVLLHGCAHNPTGIDPTPEQWEKIADLIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRLARPMYSNPPVHGARIVADVVGNPVLFNEWRAEMEMMAGRIKNVRQQLYNSITSKDNSGKDWSFILKQIGMFSFTGLNKEQTDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0479 261 Gene3D Aspartate Aminotransferase, domain 1 176 253 IPR015422 GO:0003824
Pvu1g0479 261 SUPERFAMILY PLP-dependent transferases 5 255 IPR015424 -
Pvu1g0479 261 PANTHER ASPARTATE AMINOTRANSFERASE 1 259 IPR000796 GO:0006520|GO:0008483
Pvu1g0479 261 Gene3D - 3 175 IPR015421 GO:0003824
Pvu1g0479 261 CDD AAT_like 11 253 - -
Pvu1g0479 261 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 103 116 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pvu1g0479 261 PRINTS Aspartate aminotransferase signature 34 53 IPR000796 GO:0006520|GO:0008483
Pvu1g0479 261 PRINTS Aspartate aminotransferase signature 65 77 IPR000796 GO:0006520|GO:0008483
Pvu1g0479 261 PRINTS Aspartate aminotransferase signature 133 158 IPR000796 GO:0006520|GO:0008483
Pvu1g0479 261 PRINTS Aspartate aminotransferase signature 202 220 IPR000796 GO:0006520|GO:0008483
Pvu1g0479 261 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 1 259 - -
Pvu1g0479 261 Pfam Aminotransferase class I and II 3 253 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0479 Pvu-Chr1 5119009 5121709 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0479 K00811 - gmx:547792 517.694