Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0476 ATGTTCTTCTCTTCCCTCTCTTCCTGCTTCCGCTCTTCCCAACCCACCACCCTCCACGACGCCACGCTCTCCACCAACCTCACCACCTTCATCTACCACACGGAAAACGGCTCCATTTCGCTGACATGGTCACGCTCCATGTTGGGTCGCTACCTTCACGTCCACCTCCACAACCACTCCTCCTTCCACCTCCACCTCAAGCCCTGGAACAAAACCGGTTCCAAGAAACTCTCCCACAACACCCTCTTCCTCTGGAACCTAACCAACGCCAAGTTCGGCTCCGGACCCGAACCTTGCTCCCGATTCTACCTCGCCCTCCTCGTTGACCACACCAACCTCACCCTCCTCGTCGGAGACCTAACTCCAAAAACCAAACCCCACAAACCTAACACCAAACCGCAACAAGTTCTCCTTCTCAAACGGGACCACGTCCACGTGGCGTCACACCGCAGCAGGGTGTACCAAACCAAGACCATACTGGGAGGAAAGGTTAGGGAAATCCAAATTGACTGCGACGCTTACAGTAACGAGGACGAGAGTTTGAGATTGGTTTTCTCCGTGGATGAGGAGAAGGTTCTGGAAGTGACGCGGTTGAAGTGGAAGTTCAGAGGGAGCGAGCGTGTGGAGGTGGACGGTGCCCACGTGCAGATCTCGTGGGACGTGCATGATTGGCTTTTCGAAAAGGATAAAGATCATGGTTTTAGTAATATCAGCAATGATGTGAATGGCAACAGTGATGGTGGTAAAAACGAGGGACATGCGGTTTTCATGTTTAAGTTTGAGAATGACGAGGTAGGATGTGGGAGTGGGAAGGAGGTGGATGTTGTGTGGTCTAGTGGGGAGTGGAAGAATGGAAAGAGCTGGTCGTCTTCTTCGCTGTCGGTTTCTTCTTCTGTTGGGTCTTTTGGAGGGAGTTCCTCTGTCATGGAATGGTCCAGCCTGGAGGAGAATGAATTGGTGGTTCCTTTTGGTTTTTCGTTGGTGGTTTATGCTTGGAGAAAGTAA 1005 0.5194 MFFSSLSSCFRSSQPTTLHDATLSTNLTTFIYHTENGSISLTWSRSMLGRYLHVHLHNHSSFHLHLKPWNKTGSKKLSHNTLFLWNLTNAKFGSGPEPCSRFYLALLVDHTNLTLLVGDLTPKTKPHKPNTKPQQVLLLKRDHVHVASHRSRVYQTKTILGGKVREIQIDCDAYSNEDESLRLVFSVDEEKVLEVTRLKWKFRGSERVEVDGAHVQISWDVHDWLFEKDKDHGFSNISNDVNGNSDGGKNEGHAVFMFKFENDEVGCGSGKEVDVVWSSGEWKNGKSWSSSSLSVSSSVGSFGGSSSVMEWSSLEENELVVPFGFSLVVYAWRK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0476 334 PANTHER EXPRESSED PROTEIN 2 334 IPR008586 -
Pvu1g0476 334 Pfam Plant protein of unknown function (DUF868) 25 333 IPR008586 -
Pvu1g0476 334 PANTHER OS08G0422401 PROTEIN 2 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0476 Pvu-Chr1 5038861 5040854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0476 24 333 EF-hand Containing Proteins AT5G28150 31.707 2.88e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0476 - - gmx:100806546 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0476 1 5038861 5040854 Pvu1g0476 1 5038861 5040854 ECH
Pvu1g0476 1 5038861 5040854 Pvu9g0916 9 13883865 13885241 PCT