Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0475 ATGTTGTGCAAACTCGTTCCTGTGCCACGCAAGAGAAAATCTGGTTTGAACCCGGTTTACCTTAACGTCTACGATCTAACACCCATGAATGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGGTTGAGTATGGATTTGGTGCTCATGAACGTGACACGACTGGGATTTTTGAAGTGGAGCCTAGACACTGTCCTGGATTCACCTTCAGGAAATCGATTCTCATTGGATCGACGGATATGGGGGCGAAGGAGGTTCGTGAGTTAATGGAGAGGATGGCTGAAGAGTATTCTGGGAACACCTACCACCTTATCCAGAAAAACTGCAATCACTTCTGTGATGATGTTTGTGGCAAACTAACGGGAAAGTCCACCCCTCGGTGGGTGAATCGACTTGCTAGACTTGGTTTTCTCTGCAACTGTGTTCTTCCACCCAGCCTAAATGAAACAAAGGTTCGCCAAGTTACATTAGACAGGGTTCAAGACGGAGAGAAGAAGAAAACGAGAACGCATTGCAGTAGGTATGAGGCTTCACCCAATCCTCCATTGTCTAGTAGCCGAAGGCATTGCCTTCCTCCATCTTCTGTAATTATTGCTTCTCCGTCCTCAACCTTAACAGTAAAGTGA 648 0.4645 MLCKLVPVPRKRKSGLNPVYLNVYDLTPMNGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSILIGSTDMGAKEVRELMERMAEEYSGNTYHLIQKNCNHFCDDVCGKLTGKSTPRWVNRLARLGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKTRTHCSRYEASPNPPLSSSRRHCLPPSSVIIASPSSTLTVK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0475 215 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Pvu1g0475 215 MobiDBLite consensus disorder prediction 181 202 - -
Pvu1g0475 215 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Pvu1g0475 215 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 213 - -
Pvu1g0475 215 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Pvu1g0475 215 MobiDBLite consensus disorder prediction 165 202 - -
Pvu1g0475 215 Gene3D PPPDE domains 13 173 IPR042266 -
Pvu1g0475 215 PANTHER DESUMOYLATING ISOPEPTIDASE 2 213 IPR008580 GO:0008233
Pvu1g0475 215 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0475 Pvu-Chr1 5028800 5031315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0475 K22763 - gmx:100786432 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0475 1 5028800 5031315 Pvu9g0915 9 13862269 13864330 PCT