Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0454 ATGAGCTTATCCAAGAAAGTATCCCAAACAGACGCTAAATTGAGCACCCCAAACAAAGCAACCTATTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCCTTGAGATCATCTCCATCTGGAAGCGCTAGCTCAGTGGATGCAACAGCGAGGTTTACTACTGCCGCTGGATCTCTTGGTAAAGCAGTTCTAGATCGTTCAGAATCATCCATTTCGAACAATTCTGATGATGAGGCTCACCAATACTGGCGTTGTCAGCTTCCTGATGATATCACTCCTGACTTCAAGGTCATGGGAGAAGATGAATCCCAAGGTGTTAACAACCTCTCTTTAGAAGGCTTATCTATAAATAATGATAATGAATCCTCAATGTTTCCTTCTTCTAAGGGAAGTAGATATAAGTTAAATGAGCTGCAGGAATTGTCTCAACAGCACCTTAATGGCAATACTTTTGCTGATAAATTAAGGTTTTCCAATTCAACCTACAGGGAGGAATCATCTTCACCAAGCATTTTGAACACATCAGCAAAGCCTTGGGATAGGCAAAATGGGAACACGGATTTGCATGTTAGCAATGGTCAAGAGGCACTTGTTTATGATGACAACTCTGGACATGGATTCTTAAATGATGTTTTTGCTGGGAATTCCCTTGTGAATGATACTGATTTGAACCCTTTGGAATTTTTAGCTTCTCTTTTTCCTGGGTTTGCTTCAGAAAGCCTCGCTGAAGTTTTCTTTGCCAATGGATGTGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATGGTAGTAGCTTCAATCAGAATCTGAGTCCTAAGACTCTGTCAGCTCCCAATCTGAGTGCAATGGAATTTCCAGCTCTTACTCCATCAAATGGCCAGAGTACTGCAAAATATGCCGCAGATAGTGTTCAAAATGGCAATCCTTACTTATCATCTGATAAAGACATGCTAATGTTCAAAACTAGCTCTTCTATTCCATCTAGAGGGGCTGTTGACTTTGCTTCAACTGTCAGGAAATTGGCTTCTCAGGATTCTGGTATGTGGAAGTATGATAAAAATGGTTCTGGTGATGCTTCCACTGGCTCTAGTAGAAGTTTAAATGTTCTTGCTAGTGCCTACAATGGTGGACAGGGGAGATCCAACCTTGGGGATAGATTACAGAACTATAGTTCTGCTCGGGCAGCTCCTGTTTGGCTTGAAACCGGTGACGCAGTTGCAAATATGTATTCTGATCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCTTATTTTGAGCAGGCACGACAAGCCTACCTTGTTGGCAACAAGGCCCTTGCAAAGGAGCTTAGTGTTAAAGGGCAACTGCACAACATGCATATGAAAGCCGCACATGGAAAAGCTCAAGAATCTATTTACCGTCAGAGGAATCCTGTTGCTCCAGAGATGCAAGTTAATGGGAGGGGGCACCAGAGAATGATAGATTTACATGGTCTGCATGTAAGTGAAGCCATTCACGTGCTGAAACACGAACTGAGTGTGCTTAGAAGCACGGCCAGAGCTGCCGAGCAGCGTCTTCAGGTTTACATCTGTGTTGGCACTGGCCACCACACCCGGGGCTCGCGCACTCCGGCAAGACTTCCGATAGCCGTACAGCGATATCTACTCGAAGAAGGCCTTGATTTCACCGAACCGCAGCCGGGCCTGATTCGTGTAGTGTTGTACTGA 1731 0.4425 MSLSKKVSQTDAKLSTPNKATYLNPNAAEFVPFSLRSSPSGSASSVDATARFTTAAGSLGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDESQGVNNLSLEGLSINNDNESSMFPSSKGSRYKLNELQELSQQHLNGNTFADKLRFSNSTYREESSSPSILNTSAKPWDRQNGNTDLHVSNGQEALVYDDNSGHGFLNDVFAGNSLVNDTDLNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDGSSFNQNLSPKTLSAPNLSAMEFPALTPSNGQSTAKYAADSVQNGNPYLSSDKDMLMFKTSSSIPSRGAVDFASTVRKLASQDSGMWKYDKNGSGDASTGSSRSLNVLASAYNGGQGRSNLGDRLQNYSSARAAPVWLETGDAVANMYSDLREEARDHARLRNAYFEQARQAYLVGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPEMQVNGRGHQRMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEGLDFTEPQPGLIRVVLY* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0454 576 SMART SMR_2 492 576 IPR002625 -
Pvu1g0454 576 CDD CUE_CID7_like 223 265 IPR041806 -
Pvu1g0454 576 Gene3D - 462 576 IPR036063 -
Pvu1g0454 576 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g0454 576 Pfam Domain of unknown function (DUF1771) 415 478 IPR013899 -
Pvu1g0454 576 Coils Coil 506 526 - -
Pvu1g0454 576 MobiDBLite consensus disorder prediction 165 187 - -
Pvu1g0454 576 SMART DUF1771_2 414 479 IPR013899 -
Pvu1g0454 576 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 576 - -
Pvu1g0454 576 SUPERFAMILY SMR domain-like 493 575 IPR036063 -
Pvu1g0454 576 ProSiteProfiles Smr domain profile. 495 576 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0454 Pvu-Chr1 4688377 4693508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0454 - - gmx:100799961 999.193