Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0446 ATGGAACACAGTTTGAAAAGAAAGTGTCCAGAAAATGGAGACAATTTAGTCTTGAACAGCTTTTCTCTGGATGACCTTAATGAAGATCTCTTAGAGAGGGTGCTTTCATGGCTACCGACTTCCTCCTTCTTCCGCCTTACTTCAGTGTGCAAGAGATGGAAGTCAGCTGCTGCTTCTGTGAGTTTCAAGCTTGCCTGCTCACACATTCCCTCCAGGGATCCTTGGTTTCTGATGGTTTCTCCCAGCCTCAACCAATCTATTGTCTTTGATGCTGCTGAAAACAGTTGGAAAAAACTCAATCACTTGCGTCTTCCGCTCGAAGACTCCAACATAAACTGCATGCCTGTTGCAGCCTCTGGTGGCCTGGTTTGCTACCGCAAACTTTCAGGAAACTTTGTTGTATGCAATCCAGTGACCGGATCCTGTAGTGAACTCCCTCCACTGCATTTCCCCTCAGAAAATCAACCTCTCAATGCCGTTGTGATGAGTACAACTTTCAGAGATCAAATCTCCTACAAGATTGTGTTAGTCTTCGGTGAACTCCCTAATCTTATGTTCAAAGTCTATGACTCAAGCTCTTGCTGTTGGGAAGAGGAGACTGCACTGAGGAGGGAGGTTGATGACAATTCCATTGGTTGTGATTCAATTGATGATGACCATGTTGTGTACTTCCTTAGCAAGGCTGGTACAGTGGTGGCTAGTAGCATGCAGAGGAGCCCATCTAAGCAATATTCCTCAGTTATTATTACTCACAAAGATGGTCAGGAAATGGTGTATTTCCTGAGCTCCTCAGGGACAGTAGTAGCTTGCAATTTGACATCCAGGTGCTTTTTTGAGTACCCCAGGTTGTTGCCTGTTTTCAGTGAGTACTCCATTGATATTGTGGAGTGTGGTGGTGAGATGCTGGTTGTTTTGTTATCAGAGTTCTTGGAGAGCACAAGTCTTAGGGTGTGGAAATACGATGACCCGAATCGATGCTGGCAACAGATTGCTGCAATGCCTGCAGCAATGTCTCAAGAATGGTATGGAAAGAAGGCAGATATCAACTGTGTTGGATCTGGCAATCAGATATTTATATGCTTGAACTCCCCTGAGCTATGCACTTACATTCTATGTGATTTGGCGACCAACAATTGGACCGAGTTGCCGAAATGTTGCATGAATGGAGAAGTCATGGAGTTCATGTCTGCCTTCTCATTTGAGCCGAGGATAGAGGCTTGTGTATGA 1227 0.4491 MEHSLKRKCPENGDNLVLNSFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSHIPSRDPWFLMVSPSLNQSIVFDAAENSWKKLNHLRLPLEDSNINCMPVAASGGLVCYRKLSGNFVVCNPVTGSCSELPPLHFPSENQPLNAVVMSTTFRDQISYKIVLVFGELPNLMFKVYDSSSCCWEEETALRREVDDNSIGCDSIDDDHVVYFLSKAGTVVASSMQRSPSKQYSSVIITHKDGQEMVYFLSSSGTVVACNLTSRCFFEYPRLLPVFSEYSIDIVECGGEMLVVLLSEFLESTSLRVWKYDDPNRCWQQIAAMPAAMSQEWYGKKADINCVGSGNQIFICLNSPELCTYILCDLATNNWTELPKCCMNGEVMEFMSAFSFEPRIEACV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0446 408 Gene3D - 78 399 IPR015915 GO:0005515
Pvu1g0446 408 SUPERFAMILY F-box domain 19 78 IPR036047 GO:0005515
Pvu1g0446 408 Pfam F-box domain 23 63 IPR001810 GO:0005515
Pvu1g0446 408 SUPERFAMILY Galactose oxidase, central domain 86 384 IPR011043 -
Pvu1g0446 408 SMART fbox_2 26 66 IPR001810 GO:0005515
Pvu1g0446 408 ProSiteProfiles F-box domain profile. 20 65 IPR001810 GO:0005515
Pvu1g0446 408 PANTHER F-BOX/KELCH-REPEAT PROTEIN 16 408 - -
Pvu1g0446 408 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 16 408 - -
Pvu1g0446 408 Gene3D - 18 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0446 Pvu-Chr1 4562869 4565761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0446 - - vun:114195471 771.155