Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0438 ATGTTTTCATGGTTGCTATGCGGAATCATATTCAACACGGGCTTATGCAGCTTCAATATTCACTGCAACCAACAAGACATGCATGCTCTCTTAAACTTCAAACAAGGAATCATAGATCCATCCGGTGTCATTTCTTCATGGTCCACTAAACTAGATTGCTGTCAATGGAAAGGAGTCATGTGTAATAACATCACAAGTAGAGTCACTGGAATCAGTATTCGGTGTTCTACAACTCTTCCATCTTACAGGGACGAAGAAGATAAATCACATTGCCTTACAGGTTCCATTCGCCTATCCTTGTTGTTAGTGGAGTTGGAATTTTTAGATTACTTGGATTTGAGAAACAATGACTTCTTAGCATTACAATTTGATTATGTGCATAATCATAATTCTCATAATCTATCCATACTTACTTCTCCTCGTCAGTGTGTCAACTCTTCAACTCTTGGTCATCTTGATTTATCACTTAACTGGAATCTTGCCATCAGCAACCTTCAGTGGCTTCCCTATATTTCCTCCCTGGAATATCTCAACCTCCGTGATATTGATCTTAGCAAAGAAACTAATTGGCTTCAATTAGTGACTATGCTTCCATCACTTTCATCCCTCAATATGCGTGCTTGTCAACTTAAAGACTTGAGTTTGTCTCTTAACTATGCTAATTTTACTGCACTCGAAGTTCTTTATCTTTCTGCAAATGAATTTGACTCAGAGTTACCTAAGTGGCTATTCAATCTTAGTTCCAATATCTATGATTTAGACCTTAGCTCAAGTTCTTTAATAGGACATCTACCTAAGGCATTGTTAAATCATCGAGATTTGGAAGACTTGGTCTTGGAAGACAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTGAATTCGAACATTTAAAACATCTTATTCTTGGAGTAAACAATTTTTCTGGATCTATTCCCACAAATTTGGGAAATCTATCTTCCTTAATTACCTTGGATATTGCCTCAAATCCATTGACAGGAGTTGTGTCCGAGAGAAATTTTGCTAAATTGTCAAAATTAAAGGAACTGGATATATACTCATATTCATCGTTAATCTTTGATTTTGACTCCCATTGGATTCCACCCTTTCAACTTGAAGAATTAGTTATCGGGTTTTCAAATCCCAACCTTCCTGCGTGGTTATATACTCAACGATCTATTGAAAGGTTAACTATTTGGGAATCATCATTTGAGGCTCCAAACAAATTCTGGAATTTTGTATCAAGGATGACTAAAGTCCAATTACAAGGTAATTTGATAGACGGGAACATATCAAACGTGTTGTTGAACTCTACAATCATTGATCTCTCATCGAATGGTTTGAAAGGTTCCTTGCCTCAATTATCACCAAACGTTGTCTTTGTCAACTTATCAAATAATTCATTATCAGGAGACGTGTCTCCCCTATTATGTGATAATAAGATGTTGAATGGGAAAAACAGTCTGTTGTTCTTGGACATATCATTGAATAATCTATCTGGAGGGCTTACGAATTGTTGGAAGAATTGGAAATCTTTGGTTGCTATTCACTTGGGAAGCAATAATCTATCAGGTAAGATACCCTCATCAATGGGCTTTCTATCTAACCTCACCTCACTCCATTTGCATGAGAATAAGCTAAATGGAGAGATTCCTCCCTCATTGCAAAATTGTCGCTCTCTACTGGTCTTTAATGTTCGCAATAACCACTTATCAGGAAACATACCAGATTGGATATCTCACAGGGTAATGGCTCTCCAATTAAGGTCCAATCATTTTAGTGGTAAAATCCCTCCACAAATATGCCAAATGTCTTCCCTCATTATATTGGATATTGCACATAACACAATCTCTGGTCATATACCCAATTGTCTTCCTAATATCAAAACCCTACTTTTCAACAATGTTTCTAAAAACAAACTTTCTTTTTCCTTTCCTACATCTCGTAATGCTTACATCTATGAAAGTGACAATCTTGAATTGGTTACTAAAGGTCGAGTATCAAAATATGACCGAAACCTACACTTTATGACCCTAATTGATATGTCAAGTAACAATTTGTCTGGAACAATACCTCCACAAATGTTTAGTCTTATGGGATTGTCTTCCTTGAACTTATCCAACAATAATTTATCAGGAAAAATACTAAATGAGATAGGAAATATGAAAAACTTAGAGTCTCTTGATTTTTCAAAAAACCAACTTGGGGGTGAAATTCCTCAGAGCTTATCCAGTTTGTCCTTTTTGGCTTACTTGAATATTTCATTCAACAATTTGAGAGGCAAAATACCATCAGGCACACAACTTCAAGGATTCACTGCTTTTAGTTATATGGGCAACAGTGATCTTTGTGGACCCCCACTTACCAAAATGTGCTTTCAGGATGATAAACATAAAGACACAAAGCTTGTTGGGGAAGATGGAAATCAATATGAATTTTGGCCATGGTTTTACATCGGAATAGAATATGGATTTGTAACGGGCTTTTTGGGAGTTTGTTGTGCCGTTTTCTTCAACACAAAACTAAGACATGCTTACTTCAAGTTTCTTAATGACTTGAGAGATCGACTTCGTGTCTTGGTGGTTGTCAACATGAATCCCTTCCGTTAA 2610 0.3644 MFSWLLCGIIFNTGLCSFNIHCNQQDMHALLNFKQGIIDPSGVISSWSTKLDCCQWKGVMCNNITSRVTGISIRCSTTLPSYRDEEDKSHCLTGSIRLSLLLVELEFLDYLDLRNNDFLALQFDYVHNHNSHNLSILTSPRQCVNSSTLGHLDLSLNWNLAISNLQWLPYISSLEYLNLRDIDLSKETNWLQLVTMLPSLSSLNMRACQLKDLSLSLNYANFTALEVLYLSANEFDSELPKWLFNLSSNIYDLDLSSSSLIGHLPKALLNHRDLEDLVLEDNNFDGPIPDWLGEFEHLKHLILGVNNFSGSIPTNLGNLSSLITLDIASNPLTGVVSERNFAKLSKLKELDIYSYSSLIFDFDSHWIPPFQLEELVIGFSNPNLPAWLYTQRSIERLTIWESSFEAPNKFWNFVSRMTKVQLQGNLIDGNISNVLLNSTIIDLSSNGLKGSLPQLSPNVVFVNLSNNSLSGDVSPLLCDNKMLNGKNSLLFLDISLNNLSGGLTNCWKNWKSLVAIHLGSNNLSGKIPSSMGFLSNLTSLHLHENKLNGEIPPSLQNCRSLLVFNVRNNHLSGNIPDWISHRVMALQLRSNHFSGKIPPQICQMSSLIILDIAHNTISGHIPNCLPNIKTLLFNNVSKNKLSFSFPTSRNAYIYESDNLELVTKGRVSKYDRNLHFMTLIDMSSNNLSGTIPPQMFSLMGLSSLNLSNNNLSGKILNEIGNMKNLESLDFSKNQLGGEIPQSLSSLSFLAYLNISFNNLRGKIPSGTQLQGFTAFSYMGNSDLCGPPLTKMCFQDDKHKDTKLVGEDGNQYEFWPWFYIGIEYGFVTGFLGVCCAVFFNTKLRHAYFKFLNDLRDRLRVLVVVNMNPFR* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0438 869 Gene3D Ribonuclease Inhibitor 22 337 IPR032675 -
Pvu1g0438 869 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 249 850 - -
Pvu1g0438 869 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 18 302 - -
Pvu1g0438 869 SUPERFAMILY RNI-like 222 640 - -
Pvu1g0438 869 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Pvu1g0438 869 SUPERFAMILY L domain-like 586 789 - -
Pvu1g0438 869 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 18 302 - -
Pvu1g0438 869 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 249 850 - -
Pvu1g0438 869 SMART LRR_typ_2 534 557 IPR003591 -
Pvu1g0438 869 SMART LRR_typ_2 722 746 IPR003591 -
Pvu1g0438 869 SMART LRR_typ_2 197 220 IPR003591 -
Pvu1g0438 869 SMART LRR_typ_2 674 698 IPR003591 -
Pvu1g0438 869 SMART LRR_typ_2 222 246 IPR003591 -
Pvu1g0438 869 SUPERFAMILY L domain-like 22 247 - -
Pvu1g0438 869 Gene3D Ribonuclease Inhibitor 338 795 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0438 Pvu-Chr1 4453481 4456137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0438 22 862 Miscellaneous Gene Families AT1G74190 28.195 1.76e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0438 - - pvu:PHAVU_001G042800g 1240.33