Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0437 ATGACTACACTTCCATCTCAAAAGGCAATCATTGTTTCGTGGTTGCTATGCGGAATCATATTCAACACTCGCTTATGCAGCTTCAGTATTCACTGCAACCAAAAGGACATGCATGCTCTCTTAAACTTCAAACAAGGAATCATAGATCCATCAGGTGTCCTTTCTTCATGGTCCACTAAACTAGATTGCTGTCAATGGAAAGGAGTCATGTGTAATAACATCACCAGTAGAGTCACTGGAATCAGTATTCGGTGTGCTACAACTCTTTCATCTTACAGGGACGAAGAAGATAAATCATATTGCCTTACAGGTTCCATTCACCTATCCTTGTTATTAGTGGAGTTGCAATTTCTAGATTACTTGGATTTGAGAAACAATGACTTCTTAGCATTACAATTTGATTATGTGCATAATCATAATTCTCATAATCTATCCATAGTTCCTTCTCCTCGTCAGTGTGTCAACTCTTCAACTCTTGGTCATCTTGATTTATCACTTAACAGGAATCTTGCCATCAGCAACCTTCAATGGCTTCCCTATATTTCCTCCTTGGAATATCTCAACCTCCGTGATATTGATCTTAGCAAAGAAACTAATTGGCTTCAACTAGTGACTATGCTTCCATCACTTTCATTCCTCAAAATGCGTGCTTGTCAACTTAAAGACTTGAGTTTGTCTCTTAACTATGCTAATTTTACTGCACTCAAAGTTCTTGATCTTTCTGCGAATGAATTTGACTCAGAGTTACCTAAGTGGCTATTCAATCTTAGTTCCAATATCTATGATTTAGACCTTAGCTCAAGTTCTTTAATAGGACATCTACCTAAGGCATTGTTAAATCTCCGAGAACTAGAAATTTTGGACTTGGAAGACAATAACTTTGATGGACCCCTTCCAGATTGGTTAGGTGAATTTGAACATTTAAAATATCTTATTCTAGGAGTAAACAAATTTTCTGGATCTATTCCCACAAATTTGGGAAATCTATCTTCCTTAATTACCTTGGCTATTGCCTCAAATCCATTGACAGGAGTTGTGTCTCAAAGAAATTTTGCCAAATTGTCAAAATTAAAGGAACTGCTTATATACTCATATTCCAGGTTAATCTTTGATTTTGACTCCCATTGGATTCCACCCTTTCAACTTGAAGAATTAGCTTTCGGGTTTTCAAATCCCAACCTTCCTGCGTGGTTATATACTCAACGATCTATTGAAAGGTTAACTATTTGGGAATCATCATTTGAGGCTCCAAACAAATTCTGGAATTTTGTATCAAGGATGACTAAAGTCCAATTACAAGGTAATTTGATAGACGGGAACATATCAAACGTGTTGTTGAACTCTACAATCATTGATCTCTCATCGAATGGTTTGAAAGGTTCCTTGCCTCAATTATCACCAAAC 1404 0.3668 MTTLPSQKAIIVSWLLCGIIFNTRLCSFSIHCNQKDMHALLNFKQGIIDPSGVLSSWSTKLDCCQWKGVMCNNITSRVTGISIRCATTLSSYRDEEDKSYCLTGSIHLSLLLVELQFLDYLDLRNNDFLALQFDYVHNHNSHNLSIVPSPRQCVNSSTLGHLDLSLNRNLAISNLQWLPYISSLEYLNLRDIDLSKETNWLQLVTMLPSLSFLKMRACQLKDLSLSLNYANFTALKVLDLSANEFDSELPKWLFNLSSNIYDLDLSSSSLIGHLPKALLNLRELEILDLEDNNFDGPLPDWLGEFEHLKYLILGVNKFSGSIPTNLGNLSSLITLAIASNPLTGVVSQRNFAKLSKLKELLIYSYSRLIFDFDSHWIPPFQLEELAFGFSNPNLPAWLYTQRSIERLTIWESSFEAPNKFWNFVSRMTKVQLQGNLIDGNISNVLLNSTIIDLSSNGLKGSLPQLSPN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0437 468 Gene3D Ribonuclease Inhibitor 197 302 IPR032675 -
Pvu1g0437 468 Gene3D Ribonuclease Inhibitor 28 150 IPR032675 -
Pvu1g0437 468 Gene3D Ribonuclease Inhibitor 303 467 IPR032675 -
Pvu1g0437 468 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 259 467 - -
Pvu1g0437 468 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 21 316 - -
Pvu1g0437 468 SUPERFAMILY L domain-like 143 463 - -
Pvu1g0437 468 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Pvu1g0437 468 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 21 316 - -
Pvu1g0437 468 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 259 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0437 Pvu-Chr1 4448871 4450274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0437 235 465 Miscellaneous Gene Families AT1G74180 31.020 1.15e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0437 - - pvu:PHAVU_001G042800g 681.404