Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0435 ATGCATGCTCTCTTAAACTTAAGACAAGGAATCACAGATCCATCATGTGTCCTTTCTTCATGGTCCACTAAACTAGATTGTTGCAAATGGAAAGGAGTCATGTGTAACAACATCACAAGTAGAGTTACTGGAATCAGTCTTCCGTGTTCTACAACTATTTCATCTAACAGGGACGAACAAGATAAATCACATTGCCTTACAGGTTCCATTCACCTATCTTTGTTGTTAATGGAATTGGAATTTTTAGATTACTTGGATTTGACAAACAATGACTTCTTAGCATTGCAATTTGATTATGAGCATAAACATAATTGTCATAGTCTATCCATACCTACTTTTCCTCGTCAGTGTGTCAACTCGTCAACTCTTGGTCATCTTGATTTATCATCTAACTCGAATCTTGCTATCAACAACCTTCAATGGCTTCCCTACATTTCCTCCTTGGAATATCTTGACCTTTATGATATTGATCTTAGCAAGGAAACTAATTGGCTTCAATTAGTGACTATGCTTCCATCACTTTCATTCCTCGAAATGGGTTTGTGTCAACTTAAAGACTTGAGTTGGTCTCTTCACTATGCTAATTTTACTGCACTCAAAGTTCTTCATCTTTCTGGAAACAAATTTAAGTCAGAGTTACCTAAGTGGCTATTCAATCTTAGTTCCGGTATCTATGATTTAGACCTTAGCTTAGATTCTTTAATAGGACATCTACCCAATGCGTTGTTAAATCTTCGAGAACTGGAAATCTTGAACTTGTTTGGCAATCACTTTGATGGACCCATACCAGATTGGTTAGGTGAATTCGAACATTTAAAATATCTTGATCTTGGAATAAACAAGTTTTCTGGATCTATTCCCGTGAATTTGGGAAATCTATCTTCCTTAATCACCTTGGATGTTACCATAAATCCATTGACAGGAGTTGTGTCTGAGAAAACTTTAGCCAAATTGTCAAAATTAAAGAATTTGAATATTTACTCAACATCATCGTTAATCCTTGATTTTGACTCCCATTGGATTCCACCCTTTCAACTTGAAGAATTACTTCTCAGGTTTTCAAATCCCAACCTTCCTGCGTGGTTATATACTCAACGATCTATTGAAAGTTTAACTATTTGGGAATCATCATTTGAGGCTCCAAACAAATTCTGGAATTTTGTATCAAGAATGAATGAAGTCAGATTAGGAGGTAATTTGATAGACGGGAACATGTCAAACGTGTTGTTGAACTCTACAGTGATTGATCTGTCATCGAATGGTTTGAAAGGAGACTTAGCTCCCCTCTTATGTGATCATAAGATGTTGAATGGGAAAAACAATTTGTTGTTCTTGGACATATCACAAAATCATTTATCTGGAGGACTTACAAATTGTTGGAAGAATTGGAAATCTTTGGTTGTTATTCACTTAGGAAGCAATAATCTATCAGGCAAGATACCCTCATCAATGGGCTTTCTATCTAACCTCACCTCACTCTATTTGAATGACAATAAGCTAAATGGAGAGATTCATCCCTCATTGCAAAGTTGTCACTCTCTATTGGTCTTTAATGTTCGCAATAATCACTTATCGGGAAACATAGATTGGATACCTCACAGTGTAATGGCTCTCCAATTAAGGTCCAATCATTTTAGTGGTAAAATCCCTCCACAAATATGCCAAATGTATTCCCTCATTATATTGGATATTGCACATAATGCAATCTCCGGTTATATACCCACTTGTCTTCATAATGTCAAAACCCTACTTTTCAACAATGTTCCACACAACAAACTTTCTTTTTCCTTTCATACATCTGGTAAGGTTTACGTCTATGAAGATGAAACTCTTGAATTGGTTACTAAAGGTCAAGTATTAAAATATAAAGAAAACCTACACTTTATGACCTTAATTGATATGTCAAGTAACAATTTGTCCGGAACAATACCTCCACAAATGTGTAGTCTCATTGGATTGTGTTCCTTGAACTTATCCAACAATAATTTATCAGGAAAAATACCAGATGAGATAGGAAACATGAGAAACTTAGATTATTTGAATATTTCATTCAACAATTTGAGAGGAAAAATACCATCAGGCCCACAACTTCAGGGATTTACTACTTTAAGTTATATGGGCAACAATGATCTTTCTGGACCCCCACTTACCAAAATGTTCTTTCAAGATGATAAACATAAAGACAAAAAGCTTTTTGGGGAAGATGGAAATTATTCTGAATTTTGGCTATGGTTTTACATCGGAATAGAATCTGGATTTGTGATGAGCTTTTTGGGAGTTTGTTATGTCATATTCTTCAACAAAAAACTGAGACATGCTTACTTCAAGTTTCTTTATGACTGGAGAGATCGACTTCATGTTACGGTGGTTGTCAAGATGAATCCCTCCCGTTAA 2394 0.3538 MHALLNLRQGITDPSCVLSSWSTKLDCCKWKGVMCNNITSRVTGISLPCSTTISSNRDEQDKSHCLTGSIHLSLLLMELEFLDYLDLTNNDFLALQFDYEHKHNCHSLSIPTFPRQCVNSSTLGHLDLSSNSNLAINNLQWLPYISSLEYLDLYDIDLSKETNWLQLVTMLPSLSFLEMGLCQLKDLSWSLHYANFTALKVLHLSGNKFKSELPKWLFNLSSGIYDLDLSLDSLIGHLPNALLNLRELEILNLFGNHFDGPIPDWLGEFEHLKYLDLGINKFSGSIPVNLGNLSSLITLDVTINPLTGVVSEKTLAKLSKLKNLNIYSTSSLILDFDSHWIPPFQLEELLLRFSNPNLPAWLYTQRSIESLTIWESSFEAPNKFWNFVSRMNEVRLGGNLIDGNMSNVLLNSTVIDLSSNGLKGDLAPLLCDHKMLNGKNNLLFLDISQNHLSGGLTNCWKNWKSLVVIHLGSNNLSGKIPSSMGFLSNLTSLYLNDNKLNGEIHPSLQSCHSLLVFNVRNNHLSGNIDWIPHSVMALQLRSNHFSGKIPPQICQMYSLIILDIAHNAISGYIPTCLHNVKTLLFNNVPHNKLSFSFHTSGKVYVYEDETLELVTKGQVLKYKENLHFMTLIDMSSNNLSGTIPPQMCSLIGLCSLNLSNNNLSGKIPDEIGNMRNLDYLNISFNNLRGKIPSGPQLQGFTTLSYMGNNDLSGPPLTKMFFQDDKHKDKKLFGEDGNYSEFWLWFYIGIESGFVMSFLGVCYVIFFNKKLRHAYFKFLYDWRDRLHVTVVVKMNPSR* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0435 797 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 2 221 - -
Pvu1g0435 797 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 224 778 - -
Pvu1g0435 797 SMART LRR_typ_2 269 293 IPR003591 -
Pvu1g0435 797 SMART LRR_typ_2 487 511 IPR003591 -
Pvu1g0435 797 SMART LRR_typ_2 650 674 IPR003591 -
Pvu1g0435 797 SMART LRR_typ_2 196 220 IPR003591 -
Pvu1g0435 797 SUPERFAMILY L domain-like 3 221 - -
Pvu1g0435 797 Pfam Leucine rich repeat 632 687 IPR001611 GO:0005515
Pvu1g0435 797 Gene3D Ribonuclease Inhibitor 1 314 IPR032675 -
Pvu1g0435 797 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 221 - -
Pvu1g0435 797 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 224 778 - -
Pvu1g0435 797 SUPERFAMILY RNI-like 126 693 - -
Pvu1g0435 797 SUPERFAMILY L domain-like 274 436 - -
Pvu1g0435 797 Gene3D Ribonuclease Inhibitor 315 722 IPR032675 -
Pvu1g0435 797 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0435 Pvu-Chr1 4434001 4436529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0435 3 775 Miscellaneous Gene Families AT1G74190 25.667 6.25e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0435 - - pvu:PHAVU_001G042800g 1580.84