Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0425 ATGCAGAGACTCAAAGCTCTGCTACCGCAAACTAGGACCTCACTTCGCACTCTCTATTCTCAGCATCGAGCTTTCTCTGCTCAACCAAATTACGCAGTGCACGACGATGGTGATTCCCAGGAGCAGATTCTAGTCGAAGGAAGAGTGAAATCGCGAGCAGCTATTCTCAACAGGCCTTCTTCTCTGAATTCGCTGAATTCTTCAATGGTGGCTCGATTGAAGAGGCTGTACGATTCGTGGGAAGAGAACTCTGATATTGGCTTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTTCAGATGTTCTTAGGCTGTATCACACACTCAATGAAGGAAATGCTGACGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAGGGGACTTATCTTAAACCACATGTTGCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTCCGTGTGGTAACGGATAAAACTTTTTTTTCTCACCCGGAGGCTCAAATAGGTTTCCACCCAGATGCTGGAGCTTCTTATATTTTGTCTCGCCTACCTGGCTACTTGGGGGAATACTTGGCCCTTACCGGAGATAAGCTTAATGGTGTTGAAATGATGGCCTGCGGCCTTGCTACTCATTATTCACTAAATGCTAGGCTTGCTATGCTTGAAGAACGCCTCGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATATTGTTTATCCAGATAAGAGCAGTGTCCTTCACAGGATTGATACTATTGACAGATGTTTCAGTCACGACACTGTGGAAGAAATTATTGAAGCTTTGGAGAAAGAGGCTGTCGAGTCTTGTGACAATTGGTGTTCGACTGCTCTAAGGAGAATAAGAGAAGCCTCCCCATTGAGTTTAAAAGTTATTTTACGATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTGTACGTGAGTACCGTATTTCCCTACATGGAATTTCTAAGAATGTCTCCTCCGATTTCTTCGAGGGTGTTCGAGCAAGAATGGTTGATAAAGATTTCGCACCAAAGTGGGATCCACCTAGTTTAAAAGAAATATCAGAGGACATGGTTGACTACTATTTCTCTCCGTTAGAGTCTGAACTAATGCTACCGACGGCTTTGCGAGAACCTTACATGTGA 1212 0.4315 MQRLKALLPQTRTSLRTLYSQHRAFSAQPNYAVHDDGDSQEQILVEGRVKSRAAILNRPSSLNSLNSSMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGSDVLRLYHTLNEGNADEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTFFSHPEAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMMACGLATHYSLNARLAMLEERLGKLITDEPSVVEASLAQYGDIVYPDKSSVLHRIDTIDRCFSHDTVEEIIEALEKEAVESCDNWCSTALRRIREASPLSLKVILRSIREGRFETLDKCLVREYRISLHGISKNVSSDFFEGVRARMVDKDFAPKWDPPSLKEISEDMVDYYFSPLESELMLPTALREPYM* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0425 403 CDD crotonase-like 56 220 - -
Pvu1g0425 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 20 403 - -
Pvu1g0425 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 20 403 IPR032259 GO:0003860
Pvu1g0425 403 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
Pvu1g0425 403 Gene3D - 37 397 - -
Pvu1g0425 403 SUPERFAMILY ClpP/crotonase 55 371 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0425 Pvu-Chr1 4248249 4259538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0425 1 403 Acyl Lipid Metabolism Gene Families AT4G31810 68.127 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0425 K05605 - gmx:100808892 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0425 1 4248249 4259538 Pvu1g0425 1 4248249 4259538 ECH