Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0423 ATGGCGTTTTGGAGGTCCCTCGCGCTCTCTGCGATTCTTCTTCCGCTCTTCATCCACGGCGCGCTCTGCTTCTACCTCCCTGGCGTCGCTCCACAGGACTTCCAGAAGGGAGATCCATTGCAAGTAAAAGTAAACAAATTAACTTCAACGAAGACTCAACTTCCATATACATATTATTCTCTTCCGTACTGTCCACCAGAGAAAATAGTGGATAGTGCTGAAAATCTTGGAGAAGTGCTTCGGGGTGATCGCATTGAAAATTCTCGATATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTATGTAAGCTTAAACTTGATGCCAAAACTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTATCGAGTAAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGGTGGAACCGGACTCTACTGTTTATCAACTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCTTTTACGGTGAAATATCATAGAGATACTCTAACTGAATCTGCCAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATTTGAAGGGAAGTGGGATGAAAAGGCCACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAATTCCAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCTTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCGGGCATGGTAGCAATGATAATGCTGCGTACACTTTACCGTGATATTTCAAAATACAATGAATTAGAAACCCAAGAAGAAGCACAGGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAACAACCCAGATTTGCTATGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGATACTAGTAACAATGATGTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGAGGTGGCCTAATGACAGTCATGCTCTTGCTTTGGGTTTTCATGGGGATTTTTGCTGGTTATGCCTCGGCCCGCTTATATAAAATGTTCAAAGGAGCAGAGTGGAAGAAAATTGCCCTCAAAACTGCAATCATGTTCCCTGCAATCGTTTCTGCCATTTTCTTTGTATTAAATGCTCTCATATGGGGACAAAAATCGTCTGGAGCAGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTTGGTGCCTATGTTGGATTTAAGAAGCCTGCAATTGAGAATCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCATGGTACATGAATCCAATCTTCTCAATTCTGATCGGAGGAATACTTCCATTTGGAGCTGTTTTCATCGAGCTCTTCTTTATCCTCACTTCCATATGGTTGAATCAGTTCTACTACATCTTCGGCTTCCTCTTCTTGGTCTTTGCCATCCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCTTACCTCACATCTGGCTCTTCTGCTCTGTATCTCTTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTATTATACTTCGGTTACATGCTTATAGCTTCCTACGCCTTCTTTGTTGTAACTGGATCCATCGGATTTTACGCATGCTTTTGGTTCACAAGGCTCATCTATTCCTCGGTCAAGATTGATTAG 1914 0.4216 MAFWRSLALSAILLPLFIHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCPPEKIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVEPDSTVYQLGFHVGLKGQYTGSKEEKYFIHNHLAFTVKYHRDTLTESARIVGFEVKPFSVKHEFEGKWDEKATRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNPDLLCVYVGTGVQFFGMILVTMMFAVLGFLSPSNRGGLMTVMLLLWVFMGIFAGYASARLYKMFKGAEWKKIALKTAIMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGSIGFYACFWFTRLIYSSVKID* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0423 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
Pvu1g0423 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 637 - -
Pvu1g0423 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 637 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0423 Pvu-Chr1 4217336 4222140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0423 11 637 Miscellaneous Gene Families AT5G10840 85.374 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0423 K17086 - gmx:100810506 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0423 1 4217336 4222140 Pvu1g0423 1 4217336 4222140 ECH
Pvu1g0423 1 4217336 4222140 Pvu9g0891 9 13592096 13596336 PCT