Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0418 ATGAGACACAACTTATCTTCCATATTTCAATTGAAGAAAGGATCAAACTTGAGAACTCTCTTCACTTCCCAATCACCAAAAATGTCCTCCATGGCTTTCTCCACCACCTTCTTCACTTCTCTCCATGATTTCACTCATACCAGAACAAACCCACCAAATTCTCCCTCTTTTCCTTTCATCAAATCCTCCCTTGCTTCCTCCAACTCAACCTTTTTCCATCCAACCCTTTCCCTGCAAACCTTATCAACTTTTCCCAGGTTCATAAAGCCTAGGTCTTTTTCAGTTCATGCAAGAGCTGCCACAGAAAAAACCATTTATGATTTTACCGTCAAGGATATTGACAGAAAGGATGTCCCTCTTAACAAATTTAAGGGGAAGGTTCTATTGATTGTCAATGTTGCTTCACGATGTGGTTTGACGTCATCGAATTACTCGGAGCTGTCTCGTTTGTATGAAAAGTATAAGAATCAAGGTTTGGAGGTTCTGGCTTTCCCCTGTAATCAATTTGGTATGCAAGAGCCTGGATCAAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATACAAAGCAGAATTTCCAATTTTTGACAAGGTGGATGTCAATGGACCATTTACGGCTCCAGTGTACCAGTTTCTGAAATCAAGTGCTGGAGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAGAATGGTAAAGTTATTGAAAGATACCCACCAACAACGTCGCCTTTCCAAATTGAGAAGGATATTCAGAGGTTACTTGCTGCATGA 789 0.4005 MRHNLSSIFQLKKGSNLRTLFTSQSPKMSSMAFSTTFFTSLHDFTHTRTNPPNSPSFPFIKSSLASSNSTFFHPTLSLQTLSTFPRFIKPRSFSVHARAATEKTIYDFTVKDIDRKDVPLNKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKNQGLEVLAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQRLLAA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0418 262 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 42 262 - -
Pvu1g0418 262 Pfam Glutathione peroxidase 105 213 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 ProSiteProfiles Glutathione peroxidase profile. 95 262 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 PRINTS Glutathione peroxidase family signature 123 140 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 PRINTS Glutathione peroxidase family signature 159 175 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 PRINTS Glutathione peroxidase family signature 224 233 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 ProSiteProfiles Thioredoxin domain profile. 99 261 IPR013766 -
Pvu1g0418 262 PANTHER GLUTATHIONE PEROXIDASE 42 262 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 CDD GSH_Peroxidase 104 256 IPR000889 GO:0004602|GO:0006979
Pvu1g0418 262 ProSitePatterns Glutathione peroxidases active site. 125 140 IPR029759 -
Pvu1g0418 262 ProSitePatterns Glutathione peroxidases signature 2. 162 169 IPR029760 -
Pvu1g0418 262 SUPERFAMILY Thioredoxin-like 104 261 IPR036249 -
Pvu1g0418 262 Gene3D Glutaredoxin 91 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0418 Pvu-Chr1 4179241 4185058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0418 K00432 - gmx:100305775 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0418 1 4179241 4185058 Pvu1g0418 1 4179241 4185058 ECH