Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0417 ATGGGTGAGAACACTAACGTTACCGTCACCGCCAGAGCCAAATCCAAAACCGTTCTCTCTCTTCTAACAGAACCAATCCAATGGCTGCAAATGCTCTCCTCAAAGCTAAACCCTACCTTCATGATCGGCGTCTTCCTCATCTACGGTTTAGGACAAGGTCTCTCGGGCTCACTCTTCAAGGTAGTTGCAGACTACTACTGGAAAGACGTGCAGAAGCTTCAACCCTCCACAGTTCAACTCTTAGTCGGTGTTTACTTCATCCCCTGGGTTCTCAAACCTCTTTGGGGAATCCTCACCGACGCCTTCCCCGTCAGAGGATACCGTCGCCGACCCTACTTCATCATCTCCGGTGTCATCGGCACCGTCTCCGCCGTCACTGTCGCGCTCACCGGGAACCTCGCCGTCACCGCCGCGCTCATGTGCTTCCTCGGCGTGTCGGCGTCGCTAGCGATCGCGGATGTCACGATCGATGCGTGTATTGCGAGAAACAGCATCGAGGTGAGGGAGCTGGCGCCGGACTTGCAGAGCCTCTGCGGGTACTGCTCCGGCGCCGGCGCCCTCGTCGGATACCTCGCGAGTGGGTTCTTCGTGCACCGGCTTGGACCCCAGGAGTCGCTTGGTCTCATGGCGCTTTCTCCTGCTTTGACCACTGTGCTGGGTTTTGTGATTTACGAAAACAGAACTTCGCATATTGAAAAGAAACAGGCAGTGGTGGAGAGTGTACGAACGACTATTAGAAGCATGTTCAAGACAATTAGGTATCCTCAAGTGTGGAGGCCTTCTCTGTTCATGTTCCTTTCCCTGGCTTTCAATGTAAGCACACACGAAGGCCATTTTTATTGGTATACAGAGCCAAAAGTGGGCCCTGCATTCTCTCAGGAGTTTGTAGGGGTGATCTATGCAATCGGTGCAGTGGCATCATTAATAGGGGTTTTAATCTACCACAAGGCTCTAAAAGACTACGCATTCAGAGACCTAGTATTCTATGCACAACTCCTATATGGCATATCTGGTGTGCTGGACCTGATCTTCATCCTCCGTTGGAACTTGGTCATTGGAATCCCTGACTATTTCTTTGTTGTCATTGAAGAAACTGCCACAAGAATTACAGGCAAAATCAGATGGATGCCCATGCTGGTGCTGAGCACCCAGTTGTGCCCTTTAGGCATTGAGGGCACATTTTTTGCTCTGTTAATGTGCATTGATAGCATTGGTGCCCTCTTATCCAAATGGGGTGGAGGGGTGCTTCTTCGTCTTCTCCATGTCACCAGAACTGACTTCACAAACCTTTGGTTGGCTGTTCTCATAAGGGATATGCTTAGGTTTGCAATACTTGCTTTGGTTTTTCTTGTCCCTAAAACAGGTCAATATGAGGAACTGCTTCCTTCTGATGTTTCACAAAATAACACAAGTCATGAGGTAGATGAAGAGACTTTGGAGCTTGTCCCTACCAAAGGCAAGACTGAAGTTTAA 1473 0.4976 MGENTNVTVTARAKSKTVLSLLTEPIQWLQMLSSKLNPTFMIGVFLIYGLGQGLSGSLFKVVADYYWKDVQKLQPSTVQLLVGVYFIPWVLKPLWGILTDAFPVRGYRRRPYFIISGVIGTVSAVTVALTGNLAVTAALMCFLGVSASLAIADVTIDACIARNSIEVRELAPDLQSLCGYCSGAGALVGYLASGFFVHRLGPQESLGLMALSPALTTVLGFVIYENRTSHIEKKQAVVESVRTTIRSMFKTIRYPQVWRPSLFMFLSLAFNVSTHEGHFYWYTEPKVGPAFSQEFVGVIYAIGAVASLIGVLIYHKALKDYAFRDLVFYAQLLYGISGVLDLIFILRWNLVIGIPDYFFVVIEETATRITGKIRWMPMLVLSTQLCPLGIEGTFFALLMCIDSIGALLSKWGGGVLLRLLHVTRTDFTNLWLAVLIRDMLRFAILALVFLVPKTGQYEELLPSDVSQNNTSHEVDEETLELVPTKGKTEV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0417 490 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 4 479 IPR039309 -
Pvu1g0417 490 MobiDBLite consensus disorder prediction 467 490 - -
Pvu1g0417 490 SUPERFAMILY MFS general substrate transporter 43 450 IPR036259 -
Pvu1g0417 490 Pfam BT1 family 52 232 IPR039309 -
Pvu1g0417 490 Pfam BT1 family 237 454 IPR039309 -
Pvu1g0417 490 MobiDBLite consensus disorder prediction 470 490 - -
Pvu1g0417 490 Gene3D MFS general substrate transporter like domains 23 451 IPR036259 -
Pvu1g0417 490 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 4 479 - -
Pvu1g0417 490 TIGRFAM fbt: folate/biopterin transporter 22 464 IPR004324 GO:0016021
Pvu1g0417 490 CDD MFS_FBT 43 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0417 Pvu-Chr1 4172938 4175634 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0417 - - gmx:100806186 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0417 1 4172938 4175634 Pvu1g0417 1 4172938 4175634 ECH