Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0409 ATGATGATGAAATCTATGTTTGAGTGTGGAAACCAAGATGCTAATGTTGATGATGGAGAAACTAATTGGAATAGTGGTCAGCTCCTACTGCAAGACATTCAAGAAATAAGCAAAGCTCTTTATGCTCCTTCTAGGCCTTCCTTTTCCACTGTTCATAATCGATCCAAATCTGCGGGAAAAGCCCGGTTGTCGAAATCTCAAGTTGCCTTAACACCCGGATTTCTAAAGGATGATCTGTTGCCTAAGGACAAGAAGATGTCTTCGGCATGGAATTGGAAGAAACCCTTGAAAGCTTTGACCCATATAGGTGATCAAAAGATCAAATGTTGCTTTAACCTTCATGTTCACTCAATTGAGGGTCTGCCTTTGAGTTTTGATGGCATTAGGCTGTGTGTGCTTTGGAAGAGGAAAAGCAACATTTTGCAGACGCGCCCTTCAAGGGTTATCCAGGGTGTTGCGGAGTTCAATGAAACTTTGAGTCATGGATGTTCTGTTTATGTTAGCCGCGCTATGTCTGGTCACTCTGTCAAGTATGAGTCTAAGCGGTTCCTGATTTATGCCTTTATTGTGGGGGCACCTGAACATGACATAGGGAGCCATCAGGTGGATCTCACAAGACTTTTACCTCCGACTTTAGCAGAGTTAGGGGGTGATAGAAGTTCAGGGAAATGGAGCACAAGTTTTAGTTTGACAGGGAAAGCTGTAGGAGCTAGCCTAAATGTTAGTTTCAGCTATCAAATAATGAAGGATGAGTTAATGCAATTTGGTGGTGATAATTTGAATGTTCTCAACCTTATTAATCTGAAGCCAGGCAGGCCAAGCAGCACAAGCAGTGTTATGGATTTTGGTCCTGTCCCTTTTCATTCTGATGATCGGATTTTATCCGGGGAAGCATTGATGAATTCTGGTTCAAGTCTTTCCAAATCAATCAGTTTGCTATATCAAAAACTTGATGAGGGGAACATCCATAATCCAGCACAGGCAGACTCGGAACATTTTGAACCACTTAAATCTCATGTCACATCAAATCATGAAGCTGATGACACTGAATTTTCCATTATAGAACAAATAGAAACATTGGAAGGGGACCCCTTGAAAATTGATCAGGCAGGAAATCAAACAGTAGATTTGTCAACAGTTGAAATCATTAATGTGGATGATATTATTAAGGATGATGACATATTTGTTGACAAGAACATAAGTTTTGATTCAATGGATGACACATGCAGTAGTTGTGTAAATGGGACTATGGCAGGTGACAGCAAACATAAATGCAGTAGTTCATGTGTCAGTTTAACTTTTATAAAGGATGTAGATATACTTCCTGAGACATCAGAGTTTCTTGACCAAGAACACTACCCTAATGTTAAATCAAATTATAAATCACATAGAATGGTAAAAAAATCAAGTAGCTTGGATTTTATCACTGAATCTATTGCAAATGATTTCTTAAACATGCTGGCCACAGAGAGTGGTTCATTTGGCTCAAGTTGTGATGGGGATCCACATTCTCCCAGAGAGAAGCTTTTAAGACAGTTTGAAAAAGAGGCTCAAGCTTCAGGTAACTTCACTTTTGGTTTCAAAGCAAATGAAGAGGAATTGGAGACAGAGACGCTTGGACATAGCGATGGGGATTCTACTGTGGATTCTGATTTGTCTTTATTTATTCAAGCTGCTGAAGAGGAGCATGCTAGGGAGAATCAGTTGTTAATGCAGAGAAGAAAGGCCAAAATTCTTGAAGACCTGGAGACTGATTCATTGATGCAACTGTGGGGTTTAAATGAGAGGGACTTTGAAAATTCTCCGGGAACTTTTTCTGGTGGGTTTGGAAGTCCAATTGAACTACCCAGTGAAGAAACATGCATATTACCTTCAATTGGACAAGGACTTGGTTCATTTGTTCAAATTATGGGTGGAGATCTACCTGCAGAAATGGGTAATGATATACTGGATATACTGCAGCATGTGGCATCTGATGGAGTTGAAGAGCTGTGTGATCATATCTACAAATTATTGCCTTTGCAAGATATCACTGGAAAATCCATTGAGCATATTGCGTTGGAAGCCACAACCAACAAATGGACTCCTGGAAGGCAGAGGGCATGGCAGCATGATTCGTTTGATGAATTTAATTGTAACTATTTGACAGATGAAGGCATGAGCTTGGACACTGTATCTCTAGAAGCAATAGGTCCTATGGCTGTTAATAAGATTGAATCACTTCTGATAGAAGGGTTGAGAGTACAGTCTGGCATGTTGTACGAGGAGGCACCATCTTATATCCGTCTCCAACATGCAAAGATGCCTTCCGTTGGTAGCAGAAGAGCCAACTGGAACTGGTTTCCCAAATCAGAAAGAGTTGCTAAAGTGCAACTAGAAGATGGTGGAGAAATTGGCCATGATGATCATGGATTGATGGGGCTGTCAATAACATTAGATCAGTGGTTGAGATTGGATTCTGGCATTATTGAAGGAGATCAGAATTCAGAGCAAGTTTTGAAGATCTTACAAGTACACCATTCTAAAATCACAGAGCTACATGATGGAGGGTTGAAAAATGCCATGGAGGACCAGGTAAAAACATTTGGCAGAAAGCATGGACTCTTGGGGAACCAACTTACGGTGGCTTTTATGATCCAGCTTAGGAATCCTCTACGAAATTATGAACAAGTTGGTGCTCCAATGCTGGTTTTGACTCAGGTGGAAAGAGTTCACATGCATGTAATGCAGCAAGATGACAGAAATTTTCAGGATAAAAAGGAAAAGGGAAAGGAGACCTTACTAAATGAAACAAGTGGCGAGTTTTTGGAAGACATGAATACCGAAAATGAATCACCTGGATTTGGATTTAAAATCAGAGAGATTCATCTTTCAGGTGTGCTTACCAAATCCGGAAGGAGGCAACATTGGGGTACTGCAACTCAGCAACAATCTGGGATCCGGTGGTTGCTTGCCAGTGGCATGACTAGTACTGTCAAACATTCAACTTCAACATCAAAGGCAATTGTTTTGTCATCTCCACTGTTTACGAAGAAGTTGCTTAATGAGGACACACTCTGGAGCATTTCTTGTGTTAATAGTATCATGGGGACTAACAGTAAATTGCGTCCTGTTGAAAATGTACACATTCGGAACCCTGATATCATCTTCCCAAGTTGA 3159 0.4061 MMMKSMFECGNQDANVDDGETNWNSGQLLLQDIQEISKALYAPSRPSFSTVHNRSKSAGKARLSKSQVALTPGFLKDDLLPKDKKMSSAWNWKKPLKALTHIGDQKIKCCFNLHVHSIEGLPLSFDGIRLCVLWKRKSNILQTRPSRVIQGVAEFNETLSHGCSVYVSRAMSGHSVKYESKRFLIYAFIVGAPEHDIGSHQVDLTRLLPPTLAELGGDRSSGKWSTSFSLTGKAVGASLNVSFSYQIMKDELMQFGGDNLNVLNLINLKPGRPSSTSSVMDFGPVPFHSDDRILSGEALMNSGSSLSKSISLLYQKLDEGNIHNPAQADSEHFEPLKSHVTSNHEADDTEFSIIEQIETLEGDPLKIDQAGNQTVDLSTVEIINVDDIIKDDDIFVDKNISFDSMDDTCSSCVNGTMAGDSKHKCSSSCVSLTFIKDVDILPETSEFLDQEHYPNVKSNYKSHRMVKKSSSLDFITESIANDFLNMLATESGSFGSSCDGDPHSPREKLLRQFEKEAQASGNFTFGFKANEEELETETLGHSDGDSTVDSDLSLFIQAAEEEHARENQLLMQRRKAKILEDLETDSLMQLWGLNERDFENSPGTFSGGFGSPIELPSEETCILPSIGQGLGSFVQIMGGDLPAEMGNDILDILQHVASDGVEELCDHIYKLLPLQDITGKSIEHIALEATTNKWTPGRQRAWQHDSFDEFNCNYLTDEGMSLDTVSLEAIGPMAVNKIESLLIEGLRVQSGMLYEEAPSYIRLQHAKMPSVGSRRANWNWFPKSERVAKVQLEDGGEIGHDDHGLMGLSITLDQWLRLDSGIIEGDQNSEQVLKILQVHHSKITELHDGGLKNAMEDQVKTFGRKHGLLGNQLTVAFMIQLRNPLRNYEQVGAPMLVLTQVERVHMHVMQQDDRNFQDKKEKGKETLLNETSGEFLEDMNTENESPGFGFKIREIHLSGVLTKSGRRQHWGTATQQQSGIRWLLASGMTSTVKHSTSTSKAIVLSSPLFTKKLLNEDTLWSISCVNSIMGTNSKLRPVENVHIRNPDIIFPS* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0409 1052 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 105 249 IPR019448 -
Pvu1g0409 1052 ProSiteProfiles C2 NT-type domain profile. 99 247 IPR019448 -
Pvu1g0409 1052 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 3 639 IPR039614 -
Pvu1g0409 1052 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 641 1052 IPR039614 -
Pvu1g0409 1052 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 3 639 IPR039823 -
Pvu1g0409 1052 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 641 1052 IPR039823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0409 Pvu-Chr1 4093864 4097852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0409 - - gmx:102659940 1607.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0409 1 4093864 4097852 Pvu1g0409 1 4093864 4097852 ECH